Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8929g00001 ATGACTACGTCGGAGGTATCGATCAAGGGAAATTCGGTGAACGGAAACGGAGAAAACAACGCTTGTGGCTATAACAACGGTAACGATGTTCGGAACGGTGCAGGAGAGGGTCAGAATGCTTCTTCATCTTCATCCGCGAGAGACGCGGAAGCTGCGCTTTACAGGGAGCTCTGGCACGCGTGTGCAGGTCCACTGGTGACGGTGCCTAGAGAAGGAGAGCGCGTGTTCTACTTTCCTCAAGGACATATTGAGCAGGTGGAAGCGTCGACAAATCAGGTAGCGGAACAGCATATGCCGGTTTACAATCTCCCTCCAAAGATCCTTTGTCGGGTCATCAACGTGATGCTGAAGGCGGAGCCAGACACTGATGAGGTGTTTGCGCAGGTGACCTTACTTCCTGAGCCAAATCAAGATGAGAATGCGGTGGAGAAAGAGGCTCCTCCGCCTCCTCCTCCTCGGTTTCACGTCCATTCCTTTTGTAAAACGCTGACGGCATCTGACACGAGTACTCACGGTGGGTTTTCCGTGCTGAGACGACATGCCGATGAATGCCTCCCTCCGCTGGACATGTCAAAGCAGCCACCTACCCAAGAGTTAGTGGCCAAGGATCTACATGCCAACGAGTGGCGATTCAGGCATATCTTCAGGGGTCAACCGCGTAGACACTTGCTGCAAAGCGGTTGGAGTGTTTTTGTCAGCTCCAAGAGGCTAGTTGCTGGGGATGCGTTTATATTTTTGAGGGGTGAGAATGGGGAACTTCGAGTTGGTGTTAGGCGTGCAATGAGACAGCAGGGTAATGTTCCCTCGTCGGTTATCTCGAGCCACAGCATGCATCTCGGTGTCCTTGCAACTGCTTGGCACGCCATTTTGACTGGGACCATGTTCACTGTTTATTACAAGCCTAGGACTAGTCCGGCTGAATTTATTGTTCCATATGACCAATACATGGAGTCTCTAAAAAATAATTATACTATTGGGATGCGATTTAAGATGAGGTTTGAAGGTGAAGAGGCTCCTGAGCAAAGGTTTACTGGTACCATTGTTGGAATTGAAGATGCTGATCCCAAAAGGTGGCCGGAGTCCAAATGGAGAAGTCTTAAGGTGAGATGGGATGAAACATCTAACATACCTCGTCCTGAGAGAGTTTCCCAATGGAAAATAGAGCCTGCTCTTGCTCCTCCTGCTATAAATCCTTTACCAATGCCCAGGCCTAAAAGGCCTCGATCTAATGTGGTTCCATCATCCCCAGATTCCTCGGTTCTTACTCGTGAAGCATCATCTAAAGTAAGCGTAGACCCTTTGCCAGCAAGTGGGTTCCAAAGGGTCTTGCAAGGTCAAGAATTATCGACCTTGAGAGGTAATTTTGCTGAAAGCATTGATTCTGATACAGCAGAGAAGTCTGTTGTTTGGCCACCTGCTGCAGATGATGAAAAGATTGATGTTGTTTCTACTTCAAGAAGGTATGGGTCAGAGAGCTGGATGTCAATGGGAAGGCATGAACCAACATATCCAGATCTACTTTCAGGCTTTGGGGCCCATGGAGATCAATCATCCCATACATCCTTTGTTGATCAAATTGGTCCTGTAGCTAACCTTAGTAGAAAACATTTGTTGGATCGTGAAGGCAAACATAATGTGCCCTCTAGTCTATGGCCTGTAGTGCCCTCTAGTCTATCGCTCAATTTCTTGGACTCCAATACAAAAGGCTCTGCTCAAGGTGGTGATACAACTTACCAAGTTCGAGGGAATTTGAGGTATAGTAGTGCATTTGGTGAGTACCCTGTGCTTCATGGACATAAAGTTGAGCATTCACATGGAAACTTTTTGATGCCTCCACCCCCGTCAACTCAATATGAGAGTCCTCGTTCAAGAGAACTGTTGCCCAAACCAATTTCAGGAAAACCTTGTGAGGTTTCAAAACCAAAAGACAGTGACTGTAAGCTTTTTGGCATCTCACTTCTCAGTAGCCCCATTGCACTAGAGCCTTCTTTATCACAAAGAAATGTTGCTAGTGAGCCAGTTGGACACATGCATATGACATCACACCAACAACGTACATTCGAGAATGATCAGAAGTCTGAACATTCAAGGGGAACAAAACTGGCTGATGGTTTGCTGAACGATGACCATGAAAAGCTGTTACAAACTTCTCAGTCACATCTGAAAGATGTTCAACCCAAATCTCACAGTGGTTCTGCTAGAAGTTGCACTAAAGTTCACAAGAAGGGGATTGCACTTGGTAGGTCTGTGGACCTTACAAAATTCAGTGATTATGACGAATTAATTGCTGAATTAGATCAGCTATTTGAATTTGGAGGTGAATTAACTTCTCCACAGAAGGATTGGCTTATTGTCTACACTGATAATGAGGGAGATATGATGCTTGTTGGTGATGATCCATGGCAGGAATTTGTTGCAATGGTCCGCAAAATATATATCTACCCCAAAGAGGAGATTCAGAAAATGAGCCCGGGAACCTTAAGTTCAAAGAATGAAGAGAATCAGTCAACTAGTGAAGGTGCAGACGGCCAAGAAATTAAGTGTCAGCTGAATCATTCAGCTTCAGATACCTGA 2574 0.4604 MTTSEVSIKGNSVNGNGENNACGYNNGNDVRNGAGEGQNASSSSSARDAEAALYRELWHACAGPLVTVPREGERVFYFPQGHIEQVEASTNQVAEQHMPVYNLPPKILCRVINVMLKAEPDTDEVFAQVTLLPEPNQDENAVEKEAPPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELVAKDLHANEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAILTGTMFTVYYKPRTSPAEFIVPYDQYMESLKNNYTIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPKRWPESKWRSLKVRWDETSNIPRPERVSQWKIEPALAPPAINPLPMPRPKRPRSNVVPSSPDSSVLTREASSKVSVDPLPASGFQRVLQGQELSTLRGNFAESIDSDTAEKSVVWPPAADDEKIDVVSTSRRYGSESWMSMGRHEPTYPDLLSGFGAHGDQSSHTSFVDQIGPVANLSRKHLLDREGKHNVPSSLWPVVPSSLSLNFLDSNTKGSAQGGDTTYQVRGNLRYSSAFGEYPVLHGHKVEHSHGNFLMPPPPSTQYESPRSRELLPKPISGKPCEVSKPKDSDCKLFGISLLSSPIALEPSLSQRNVASEPVGHMHMTSHQQRTFENDQKSEHSRGTKLADGLLNDDHEKLLQTSQSHLKDVQPKSHSGSARSCTKVHKKGIALGRSVDLTKFSDYDELIAELDQLFEFGGELTSPQKDWLIVYTDNEGDMMLVGDDPWQEFVAMVRKIYIYPKEEIQKMSPGTLSSKNEENQSTSEGADGQEIKCQLNHSASDT 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8929g00001 857 Gene3D - 156 261 IPR015300 -
Mupr8929g00001 857 Gene3D - 322 392 - -
Mupr8929g00001 857 Gene3D - 730 823 - -
Mupr8929g00001 857 MobiDBLite consensus disorder prediction 678 702 - -
Mupr8929g00001 857 MobiDBLite consensus disorder prediction 393 432 - -
Mupr8929g00001 857 FunFam Auxin response factor 322 394 - -
Mupr8929g00001 857 MobiDBLite consensus disorder prediction 1 44 - -
Mupr8929g00001 857 SMART B3_2 159 261 IPR003340 GO:0003677
Mupr8929g00001 857 SUPERFAMILY CAD & PB1 domains 736 811 - -
Mupr8929g00001 857 SUPERFAMILY DNA-binding pseudobarrel domain 155 288 IPR015300 -
Mupr8929g00001 857 ProSiteProfiles B3 DNA-binding domain profile. 159 261 IPR003340 GO:0003677
Mupr8929g00001 857 MobiDBLite consensus disorder prediction 411 426 - -
Mupr8929g00001 857 MobiDBLite consensus disorder prediction 683 702 - -
Mupr8929g00001 857 CDD B3_DNA 157 259 IPR003340 GO:0003677
Mupr8929g00001 857 Pfam B3 DNA binding domain 159 260 IPR003340 GO:0003677
Mupr8929g00001 857 ProSiteProfiles PB1 domain profile. 734 816 IPR000270 GO:0005515
Mupr8929g00001 857 MobiDBLite consensus disorder prediction 393 409 - -
Mupr8929g00001 857 FunFam Auxin response factor 157 261 - -
Mupr8929g00001 857 Pfam AUX/IAA family 780 822 IPR033389 -
Mupr8929g00001 857 Pfam Auxin response factor 285 367 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Mupr8929g00001 857 FunFam Auxin response factor 729 823 - -
Mupr8929g00001 857 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 52 823 IPR044835 GO:0003677|GO:0006355|GO:0009725
Mupr8929g00001 857 MobiDBLite consensus disorder prediction 822 857 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8929g00001 Mupr-Chr8929 13004 17432 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8929g00001 1 855 B3 DNA Binding Superfamily AT5G62000 64.948 0.0 1118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Mupr8929g00001 B3 2.3e-20 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8929g00001 - - gmx:100815956 1517.29