Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8928g00001 ATGGAGGCCAGGGGTGTGGAGAGGAAGAAAGCATTGGTTGAGAAGGTGAGAAAGAATAGCACAGTGGAAGAGGAGGTGGAGAATGAAGTGGAAGAGGAGGATGAAAGTGGTGTTTGTCTCACAGAAGAAGAGAAGAGGAAAGGGGTTAGTAGTAGTGGTGTTGGTGTTGGTGGGAGAAGAGGGTCAAGTGGGGGTGGTGGAGGGGTTTCTCCACCTTCATGTCAAGCAGAGAGGTGTGGTGCTGACTTGACTGATGCAAAGAGGTACCATCGCCGCCACAAGGTCTGTGAGTTTCATTCCAAGGCACCTGTTGTGGTGGTTGCAGGGCTGAGGCAGAGGTTTTGCCAGCAATGTAGCAGGTTCCATGACCTGGCAGAGTTTGATGAAGCCAAGAGAAGCTGCCGGCGACGGTTGGCCGGACACAACGAACGGCGCCGGAAAAACAACCCAGAAGCTGGCAATGAGGGCAGCAAAGGCCATCACCCTAAGGAAACAACACAGTGCAGGCTTGCTGATGAGAGGGGGAGAATTCAGATGACCCTACCAGGGAGTTCTGGCTACAAGTCTTTCAATATTAGATGA 582 0.5223 MEARGVERKKALVEKVRKNSTVEEEVENEVEEEDESGVCLTEEEKRKGVSSSGVGVGGRRGSSGGGGGVSPPSCQAERCGADLTDAKRYHRRHKVCEFHSKAPVVVVAGLRQRFCQQCSRFHDLAEFDEAKRSCRRRLAGHNERRRKNNPEAGNEGSKGHHPKETTQCRLADERGRIQMTLPGSSGYKSFNIR 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8928g00001 193 MobiDBLite consensus disorder prediction 138 174 - -
Mupr8928g00001 193 MobiDBLite consensus disorder prediction 16 75 - -
Mupr8928g00001 193 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 42 153 IPR044817 GO:0003677
Mupr8928g00001 193 Gene3D - 64 135 IPR036893 GO:0003677|GO:0005634
Mupr8928g00001 193 FunFam Squamosa promoter-binding-like protein 14 66 135 - -
Mupr8928g00001 193 MobiDBLite consensus disorder prediction 144 171 - -
Mupr8928g00001 193 Pfam SBP domain 74 147 IPR004333 GO:0003677
Mupr8928g00001 193 SUPERFAMILY SBT domain 72 152 IPR036893 GO:0003677|GO:0005634
Mupr8928g00001 193 ProSiteProfiles Zinc finger SBP-type profile. 71 148 IPR004333 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8928g00001 Mupr-Chr8928 1848 3078 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8928g00001 1 193 SBP-box Gene Family AT3G15270 46.939 2.16e-41 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Mupr8928g00001 SBP 1.1e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8928g00001 - - gmx:100800646 294.278