LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr8917g00005	ATGGCCGTGGAGCTGGTGATGGGGTATAGGAACGATAATTTTGCGGAAGAGAATGCGGTTCGTGAAGCCGCGTCGGGGCTAGAGAGCGTCGAGAAGCTCATCAGATTGCTGTCACAGACTCAACAATACCAGCACACCATGGAAATTGAGACAGACTACAGAGCTGTCGCTGACGTGGCGGTTTCCAAGTTCAAGAAGGTGATTTCGCTTCTGGGTCGAACCAGAACCGGTCACGCTCGTTTCAGAAGAGCCCCCGTCGCTCCCCCTCCTCCGGAGCCCAGAGTCTATCGTGCGACGCCGCTGCAGCAGATCCCGCCACCCACTGACCACCCTCTCATCCCCAAAAAAGGCCTTCTTGAGCGAAAGGACTCTTCCAAGACCATTCATTTCTCCTATTCTAATTCCTTTGTCTCGTCCCTCACCGGTGACACCGACACTAAACAGCCCTGCTCCTCCTCGCCGGCCACGCCTTTTCAGATCACCAACCTCTCTCAATCCCATGTCTCCTCCGCCGGAAAGCCTCCTCTTTCTTCCTCTTCCTTGAAGCGGAAGTGTAGCTCTGACAACTTGGGCTCTGCCAAGTGTGCCAGTTCCTCTGCCCGATGCCATTGTTCAAAGAAGAGCAGAAAAATGAGGCTGAAGAGAGTGGTGAGGGTTCCAGCAATAAGCTTGAAGATGGCTGATATTCCACCTGATGATTATTCTTGGAGGAAATACGGACAGAAACCCATTAAAGGATCCCCTCATCCAAGAGGTTATTACAAGTGCAGCAGCGTTAGAGGGTGTCCAGCGCGGAAGCACGTAGAGAGGGCTCTGGATGACCCAGCTATGTTGGTAGTGACATATGAAGGCGAACACAACCACACACTCTCTGCGACCGAAGCTACTAATCTTATCCTAGAATCCTCTTAA	912	0.5241	MAVELVMGYRNDNFAEENAVREAASGLESVEKLIRLLSQTQQYQHTMEIETDYRAVADVAVSKFKKVISLLGRTRTGHARFRRAPVAPPPPEPRVYRATPLQQIPPPTDHPLIPKKGLLERKDSSKTIHFSYSNSFVSSLTGDTDTKQPCSSSPATPFQITNLSQSHVSSAGKPPLSSSSLKRKCSSDNLGSAKCASSSARCHCSKKSRKMRLKRVVRVPAISLKMADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPAMLVVTYEGEHNHTLSATEATNLILESS	303

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr8917g00005	303	Gene3D	WRKY domain	217	291	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Mupr8917g00005	303	Pfam	Plant zinc cluster domain	182	228	IPR018872	-
	Mupr8917g00005	303	ProSiteProfiles	WRKY domain profile.	225	291	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Mupr8917g00005	303	FunFam	WRKY transcription factor 65	214	291	-	-
	Mupr8917g00005	303	PANTHER	WRKY TRANSCRIPTION FACTOR 21-RELATED	20	295	IPR044810	GO:0003700
	Mupr8917g00005	303	MobiDBLite	consensus disorder prediction	139	158	-	-
	Mupr8917g00005	303	SUPERFAMILY	WRKY DNA-binding domain	227	290	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Mupr8917g00005	303	SMART	WRKY_cls	230	290	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Mupr8917g00005	303	Pfam	WRKY DNA -binding domain	232	288	IPR003657	GO:0003700\|GO:0006355\|GO:0043565

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr8917g00005	Mupr-Chr8917	51945	53285	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr8917g00005	1	294	WRKY Transcription Factor Family	AT2G24570	42.900	2.31e-71	221

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	WRKY	Mupr8917g00005		WRKY	4e-26	CL0274