LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr8914g00001	ATGGCTCACAAAACCGAGAAAGAAGAAACCGACTTCAAGGTCCCCGAGACGATCACGCTTTGCGTTAACAACTGCGGCGTCACCGGGAATCCCGCCACCAACAACATGTGCCAGAAGTGCTTCGCCGCGTTCACCGCTTCCACCGCTACCACCTCCGCCGCCGGAATCTCCCCGCCGGCGTCCAGATCCGGCACGTCCGCCCGCCCTCAGAAGAGATCCTTCCCCGAAGAGCCCTCGCCGGCCGCTGATCCTCCGTCCTCCGACCAAACCACGCCGTCCGAGGCCAAGCGCGTCGTCAACCGCTGCTCCGGCTGCCGGCGGAAGGTCGGACTCACCGGATTCCGGTGCCGGTGCGGCGAACTCTTCTGCGCCGAGCACCGGTACTCCGACCGCCATGACTGCAGCTTCGACTACAAAGCCGCCGGAAGAGAAGCCATCGCCAGGGAGAATCCGGTCATCAGAGCCGCCAAGATCGTCAAAGTCTGA	486	0.6379	MAHKTEKEETDFKVPETITLCVNNCGVTGNPATNNMCQKCFAAFTASTATTSAAGISPPASRSGTSARPQKRSFPEEPSPAADPPSSDQTTPSEAKRVVNRCSGCRRKVGLTGFRCRCGELFCAEHRYSDRHDCSFDYKAAGREAIARENPVIRAAKIVKV	161

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr8914g00001	161	MobiDBLite	consensus disorder prediction	52	97	-	-
	Mupr8914g00001	161	Gene3D	-	1	69	-	-
	Mupr8914g00001	161	Gene3D	-	76	157	IPR035896	-
	Mupr8914g00001	161	Pfam	AN1-like Zinc finger	102	139	IPR000058	GO:0008270
	Mupr8914g00001	161	FunFam	Zinc finger AN1-type containing 6	76	157	-	-
	Mupr8914g00001	161	SMART	A20_3	18	42	IPR002653	GO:0003677\|GO:0008270
	Mupr8914g00001	161	PANTHER	AN1-TYPE ZINC FINGER PROTEIN	19	160	-	-
	Mupr8914g00001	161	SUPERFAMILY	Glucocorticoid receptor-like (DNA-binding domain)	20	54	-	-
	Mupr8914g00001	161	MobiDBLite	consensus disorder prediction	52	72	-	-
	Mupr8914g00001	161	FunFam	Zinc finger A20 and AN1 domain-containing stress-associated protein 1	1	70	-	-
	Mupr8914g00001	161	SMART	AN1_Zf_4	102	139	IPR000058	GO:0008270
	Mupr8914g00001	161	Pfam	A20-like zinc finger	20	41	IPR002653	GO:0003677\|GO:0008270
	Mupr8914g00001	161	ProSiteProfiles	Zinc finger AN1-type profile.	96	142	IPR000058	GO:0008270
	Mupr8914g00001	161	MobiDBLite	consensus disorder prediction	83	97	-	-
	Mupr8914g00001	161	SUPERFAMILY	AN1-like Zinc finger	86	155	IPR035896	-
	Mupr8914g00001	161	ProSiteProfiles	Zinc finger A20-type profile.	15	49	IPR002653	GO:0003677\|GO:0008270

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr8914g00001	Mupr-Chr8914	9770	10255	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr8914g00001	8	161	C2H2 Transcription Factor Family	AT3G52800	39.881	2.20e-33	114

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr8914g00001	-		-	gmx:100787293	287.345