Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8911g00011 ATGGCTAGACCCACAGATAATGGCGTGGCTTCAGACAGTGAGGCCACCCAGCATATGAATGTCTTCATGGCTGCTGTTGGGAATCCAAGAACTTGGATTCCATATATGAACAGCAAAGACTGTTCTCAAGGATTTTGTAGCCTTTACTGTCCACAATGGTGTTACATAGTGTATCCTCCTCCTCCACCCTTCGAGTACCCTGATGATGATTCAAGCCCAAATTTCTCCCCTCTTGTCATTGCAATCATTGGGATCTTGGCCACTGCTTTTCTTCTGGTGAGTTACTACACTCTAATATCCAAGTACTGTAGTCCCAGAGAGTCTGCACGCAGAGACCCAAACGATGGGTTGCAAGACAATCACAATCCCTCTCTCCACGAACCATGGCATGCTTCAACCACAGGCCTGGATGAGGCTCTAATAAAATCAATTGCAGTTTTCAAGTACAAGAAAGGAGAGGGTGGTTCTGTTGGAGTCACGGATTGTTCAGTTTGCCTCAGCGAGTTTCAAGATGATGAAAGTGTTAGACTCTTGCCAAAATGCAGCCACGTTTTCCACGTTCCTTGCATTGACACGTGGCTCAAGTCTCACTCTAGCTGCCCCCTATGTCGTGCTGGCATATTCACTTTCAACGCCTCAGCTCTTCAGGTTCATACCCCGGAGGTAGAGGTCCCTTCAAGGAACGAAACTTCTGAAAATTATCAAATAGTTGTTGGAAGTGGCAATGAATTTGTGGTGGTGGAAGAAGAAAGCATGCATCAGCATCATGCTAGAGCTTATCCAAAGCCTGCATTGCGTGCTTTTAGTGATTTAAGTAGTTTGCAGGGCAGGCACAGAGTGATTGAGATTAGAGAAGAAGTGTGTGAATCCATTGGTAGGTCCGTGTCCATGGACCATTCGTTTCAAAGTGGCCTTTCTGTTGCTCATGTGTTGCAAATGAACGAAGAGGAAGATTCCCAACTAGAAGGGTGCTCAGGCTCGTGCTCTACTGAACCTGGTCCTTCAAAGAGATCACAAGGAGAGAGTAACAAGTCCAGCTACAAAACAAGGGTGTTGCATTGCGTGTTGAGCCCAATTGCAATGAAGAGATCCTTTTCCGGTGGAAGATTCTCGGTTAGCAAAAGTGGCAGGCCAAGGCACGGAATTATACCCATCTGA 1158 0.4637 MARPTDNGVASDSEATQHMNVFMAAVGNPRTWIPYMNSKDCSQGFCSLYCPQWCYIVYPPPPPFEYPDDDSSPNFSPLVIAIIGILATAFLLVSYYTLISKYCSPRESARRDPNDGLQDNHNPSLHEPWHASTTGLDEALIKSIAVFKYKKGEGGSVGVTDCSVCLSEFQDDESVRLLPKCSHVFHVPCIDTWLKSHSSCPLCRAGIFTFNASALQVHTPEVEVPSRNETSENYQIVVGSGNEFVVVEEESMHQHHARAYPKPALRAFSDLSSLQGRHRVIEIREEVCESIGRSVSMDHSFQSGLSVAHVLQMNEEEDSQLEGCSGSCSTEPGPSKRSQGESNKSSYKTRVLHCVLSPIAMKRSFSGGRFSVSKSGRPRHGIIPI 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8911g00011 385 SUPERFAMILY RING/U-box 161 209 - -
Mupr8911g00011 385 MobiDBLite consensus disorder prediction 319 345 - -
Mupr8911g00011 385 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 124 208 IPR013083 -
Mupr8911g00011 385 FunFam E3 ubiquitin-protein ligase ATL6 125 209 - -
Mupr8911g00011 385 CDD RING-H2_EL5-like 161 204 - -
Mupr8911g00011 385 SMART ring_2 162 203 IPR001841 -
Mupr8911g00011 385 ProSiteProfiles Zinc finger RING-type profile. 162 204 IPR001841 -
Mupr8911g00011 385 PANTHER RING-H2 FINGER PROTEIN ATL16 63 329 IPR044600 GO:0016567|GO:0016740
Mupr8911g00011 385 Pfam Ring finger domain 161 204 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8911g00011 Mupr-Chr8911 28414 31293 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8911g00011 23 364 C3H Transcription Factor Family AT3G03550 40.374 2.02e-65 210
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8911g00011 - - vun:114176645 582.408