Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8897g00002 ATGCCAAAGTCGAAGCGAAATAAGCAAGTGACGCTGTCGAAGACGAAGAAAAAGGGAAGAGATCATAAAGAGGCGATGGTGAACGGAATAAAAGATGCGGCGGAAAAGTTCGGATGGGTGTACGTGTTCTCATTCGAGAACATGAGGAATCAGAAATTCAAGGAGTTCAGGGAACAGTTGAAATCGAATAGCAGGTTCTTTTTGGGTTCTAACAAAGTAATGCAGGTTGCCCTAGGTCGCTCTGCCGCAGATGAGATAAGACCTGGTCTTCACAAGGTTTCCAAGCTGTTGCGTGGAGATGCTGGGATGTGTTTTACCAATTTGTCTAAAGAAGAAGTTGAAAGGCTGTTTAAAGAATTTGAGGAATATGACTTTGCAAGAACAGGAACCATTGCTACTGAAAAGGTGGATCTCAAAGAGGGTCCTTTAGAGCAATTCACGCATGAGATGGAACCTTTTCTGCGGAAGCAAGGCATGCCTGTTCGGTTAAATAAAGGAGTCGTGGAGCTTGTTTCGGATTTTGTTGTTTGTGAGGAGGGGAAGCCCTTGTCACCAGAGGCTGCTCGTATACTGCGCTTAATGGGAATCAAGATGGCTACATTTCGACTTCACCTAATTTGCAGGTGGAGTCCTGATGAGTTTGAACTTTACATTGATGGGCCGGATGAATCAGATGTTGAATGCTCGTATGTGAGAGGTTTCTGTGTACTAGGCCGAGTGATTAGATCATTAGTATCTGTTGAAGGGAATTCACTCCCCAATCTTCAAATTCTTCAGTCAATCAAGAAAATTACCGTGTTGGCTGTGAAAACTAGACACCCCCGTTTGCATAGCAACACAACTTACTTTCAAAGGAAAGAGAAAGAGAGATACCTGAATAGTACTGACGAGGGCGGGTTTGGGGTGATAAATAGCGACTTCGGAGGGTTTTGGTGGCCTCTTCTGCTACTTCATATCCGCTTCTTCTATCATTAA 975 0.44 MPKSKRNKQVTLSKTKKKGRDHKEAMVNGIKDAAEKFGWVYVFSFENMRNQKFKEFREQLKSNSRFFLGSNKVMQVALGRSAADEIRPGLHKVSKLLRGDAGMCFTNLSKEEVERLFKEFEEYDFARTGTIATEKVDLKEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPEAARILRLMGIKMATFRLHLICRWSPDEFELYIDGPDESDVECSYVRGFCVLGRVIRSLVSVEGNSLPNLQILQSIKKITVLAVKTRHPRLHSNTTYFQRKEKERYLNSTDEGGFGVINSDFGGFWWPLLLLHIRFFYH 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8897g00002 324 Pfam Insertion domain in 60S ribosomal protein L10P 126 196 IPR040637 -
Mupr8897g00002 324 FunFam Ribosome assembly factor mrt4 29 132 - -
Mupr8897g00002 324 Pfam Ribosomal protein L10 19 120 IPR001790 -
Mupr8897g00002 324 MobiDBLite consensus disorder prediction 1 16 - -
Mupr8897g00002 324 Gene3D - 30 211 IPR043141 -
Mupr8897g00002 324 PANTHER MRNA TURNOVER PROTEIN 4 MRTO4 1 220 - -
Mupr8897g00002 324 CDD Ribosomal_P0_like 21 184 IPR033867 GO:0000027
Mupr8897g00002 324 SUPERFAMILY Ribosomal protein L10-like 20 144 IPR043141 -
Mupr8897g00002 324 Gene3D - 125 198 IPR043164 -
Mupr8897g00002 324 MobiDBLite consensus disorder prediction 1 24 - -
Mupr8897g00002 324 FunFam Ribosome assembly factor mrt4 125 198 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8897g00002 35 203 Cytoplasmic Ribosomal Protein Gene Family AT3G11250 20.710 1.76e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8897g00002 K14815 - gmx:100500064 433.335