Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8885g00002 ATGGAGGAGGAAGAGCACGAGGTGTACGGAGCAGAGATCCCAGACGAGGGAGAGATGGAAGGAGACGTTGACATGTCCGCCGCCGACGATGACGCCGCCGTCAAGGAGCTCGACGAGATGAAGCGCCGACTGAAAGAAATGGAAGAGGAAGCCGCCGCTCTTCGCGAGATGCAAGCCAAGGTCGAGAAGGAGATTGGCAACGTTCAAGATCCTGCTAATGGAACTGCTTCTCAGGCAAACAAGGAGGAGGCAGATGCTCGGTCTGTTTTTGTTGGCAATGGTCATTCTTATTACTCAGGTTCTATAATTAGCGCTGGGATGCTTACATTGTATTTTGTGTGGGGACAATGTAATTGGTGTTTCTTAGGGTTACTAGAGGTGAAAAAAGAAACTGGAGTAGAATGTGTTAAAGATGCATCAACTTCACTCCGGGAGGAGACAGCTTGTGGTTCTTTTGGAAGAACATTCTGTAAGTGTTGGGCATGCAATCCTAGTCATAGAGCCCTATTGTTGCCTGCAGTGAGGTCTGTGGTGCCTCTGTTGTGTGTCATTTGGCCAACAAGCCAATGGGTTGATTATGCATGCACACCAGAAGAAGTGCAGCAACACTTTCAATCCTGTGGTACTGTGAACAGGGTCACTATCCTGACAGACAAGTTTGGCCAGCCTAAAGGTTTTGCTTATGTGGAATTTGTTGAAACTGAGGCTATTCAAGAGGCTCTCCTGTTGAATGAATCTGAATTGCATGGCCGTCAATTGAAGGTTTTGCCTAAGAGGACCAATGTTCCTGGAATGAAGCAATATCGTCCTAGGCGCTTTAATCCTTACATGGCATATGGCTTCAGGAGGCCATATACTCCTCCTTACTTTTACTCCCCTTATGGATATGGGAAGGTTCCTAGGTTTAGAAGGCCAAATCGTTACATGCCGTACTACTAG 939 0.4728 MEEEEHEVYGAEIPDEGEMEGDVDMSAADDDAAVKELDEMKRRLKEMEEEAAALREMQAKVEKEIGNVQDPANGTASQANKEEADARSVFVGNGHSYYSGSIISAGMLTLYFVWGQCNWCFLGLLEVKKETGVECVKDASTSLREETACGSFGRTFCKCWACNPSHRALLLPAVRSVVPLLCVIWPTSQWVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVETEAIQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRFNPYMAYGFRRPYTPPYFYSPYGYGKVPRFRRPNRYMPYY 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8885g00002 312 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H 5 269 - -
Mupr8885g00002 312 SMART rrm1_1 191 256 IPR000504 GO:0003723
Mupr8885g00002 312 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 192 254 IPR000504 GO:0003723
Mupr8885g00002 312 SUPERFAMILY RNA-binding domain, RBD 192 280 IPR035979 GO:0003676
Mupr8885g00002 312 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 191 260 IPR000504 GO:0003723
Mupr8885g00002 312 Coils Coil 30 64 - -
Mupr8885g00002 312 MobiDBLite consensus disorder prediction 1 23 - -
Mupr8885g00002 312 CDD RRM_II_PABPs 191 256 - -
Mupr8885g00002 312 Gene3D - 189 264 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8885g00002 Mupr-Chr8885 18629 22810 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8885g00002 191 255 Eukaryotic Initiation Factors Gene Family AT2G36660 36.364 2.00e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8885g00002 K14396 - gmx:100789721 259.61