Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8882g00002 ATGTCGTCGTCGTCGTCGTCCAGTTCGCCGTGCGCCGCGTGCAAGATTCAGCGTCGGAAGTGCACGCAGGAGTGTGTTTTCGCTCCGTATTTTCCGCCGGACAACCCGCAGCGGTTCGCGTACGTGCACAAGGTGTTCGGGGCGAGCAACGTGGCGAAACTTCTGAACGAGCTGAACGCGGCGCAGCGGGAGGACGCGGTTAAGTCCCTGGCTTACGAGGCGGAGGCGCGTCTGAGGGACCCAGTGTACGGGTGCGTGGGCCTCATCTCCATCCTCCAGCACAGGCTCAAGCAGTTACAGACTGAACTCCACCACGCCAAGAAGGAACTCGCCTCTTACGTCGGACCCCACGCCATGCTTCCTCCTCCCCCTCCTCCTCCGCCCCGTACTTTCTCTCTCTTCCCCTTCAAAACTGCTCCTCCTTTTGGCTTCAACGACGACGGCGCTTCCGCTTCCCATGCCGCCTTCAACCACCTCTCTCTCATTTCGCCTTCCCCCGCCGCGGATCATTCTCTTCCTCTTCCGCATCACCAACATCTAATGCGCTCACCGGTGCACCCCAAGCCCCAAACCGACCCCGGTTCAAATGAGATTGGCATAGTTGTTCTCGGTCGGAAGCAAAAGGGTGTAAAGAACAAAAGAGAGACAAACATGCAGAAAGAGGACGGAAGATGCATTTTAGAAAGTAGGATCTGTATTGATGTTAGACAACGATTTTTCTAG 723 0.5685 MSSSSSSSSPCAACKIQRRKCTQECVFAPYFPPDNPQRFAYVHKVFGASNVAKLLNELNAAQREDAVKSLAYEAEARLRDPVYGCVGLISILQHRLKQLQTELHHAKKELASYVGPHAMLPPPPPPPPRTFSLFPFKTAPPFGFNDDGASASHAAFNHLSLISPSPAADHSLPLPHHQHLMRSPVHPKPQTDPGSNEIGIVVLGRKQKGVKNKRETNMQKEDGRCILESRICIDVRQRFF 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8882g00002 240 Coils Coil 89 109 - -
Mupr8882g00002 240 MobiDBLite consensus disorder prediction 167 197 - -
Mupr8882g00002 240 Pfam Lateral organ boundaries (LOB) domain 10 107 IPR004883 -
Mupr8882g00002 240 ProSiteProfiles LOB domain profile. 9 110 IPR004883 -
Mupr8882g00002 240 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 7 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8882g00002 Mupr-Chr8882 15306 16918 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8882g00002 5 121 AS2 family AT5G66870 83.761 1.34e-66 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mupr8882g00002 LOB 3.1e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8882g00002 - - gmx:100812543 310.071