Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8878g00008 ATGGTACAAGCAAAGAAGTTCAGGGGAGTAAGGCAGCGCCAATGGGGCTCTTGGGTCTCCGAAATTCGTCACCCCTTACTGAAGAGAAGGGTGTGGCTAGGTACATTTGAGACAGCAGAGGCTGCAGCAAGGGCATATGATCAAGCAGCAATTTTGATAAGTGGTCAAAATGCCAAGACCAATTTCCCTACACCAATGAACCAGCCTCAAGGTGCTGCTACTGCTACCACTCCTTGTGTAGACCCTTTCTCATCTCCAAATGTTCTTTCTGAGCATCTGGTTAGAAAGCTGAAGAGAAGCTGCAAAGACTCTTCTCCATCTCTCACATGTCTGAGGCTAGATGCTGACAATTCCCACATTGGAGTATGGCAAAAGGGTGCAGGACCACACTCAGACTCTAACTGGATCATAAGGGTGGAGCTTGGAAAGAAACATGGAGAGGGTGATTCTGGTGTGTCATCAGCAGGGTCACCACCAAAAACTTGTGGTGATTTTGATGGTGATGAAGAGAACAGAATTGCCATGCAGATGATTGATGAGCTACTTAATTGGAATTATCCCTATGGTTCA 570 0.4649 MVQAKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAAILISGQNAKTNFPTPMNQPQGAATATTPCVDPFSSPNVLSEHLVRKLKRSCKDSSPSLTCLRLDADNSHIGVWQKGAGPHSDSNWIIRVELGKKHGEGDSGVSSAGSPPKTCGDFDGDEENRIAMQMIDELLNWNYPYGS 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8878g00008 190 SMART rav1_2 6 69 IPR001471 GO:0003700|GO:0006355
Mupr8878g00008 190 FunFam Ethylene-responsive transcription factor 2 5 64 - -
Mupr8878g00008 190 MobiDBLite consensus disorder prediction 146 167 - -
Mupr8878g00008 190 ProSiteProfiles AP2/ERF domain profile. 6 63 IPR001471 GO:0003700|GO:0006355
Mupr8878g00008 190 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 4 130 - -
Mupr8878g00008 190 Pfam AP2 domain 6 51 IPR001471 GO:0003700|GO:0006355
Mupr8878g00008 190 CDD AP2 5 63 IPR001471 GO:0003700|GO:0006355
Mupr8878g00008 190 PRINTS Ethylene responsive element binding protein signature 7 18 IPR001471 GO:0003700|GO:0006355
Mupr8878g00008 190 PRINTS Ethylene responsive element binding protein signature 29 45 IPR001471 GO:0003700|GO:0006355
Mupr8878g00008 190 Gene3D AP2/ERF domain 5 64 IPR036955 GO:0003700|GO:0006355
Mupr8878g00008 190 SUPERFAMILY DNA-binding domain 6 64 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8878g00008 Mupr-Chr8878 51128 52107 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8878g00008 1 187 AP2-EREBP Transcription Factor Family AT5G25390 56.684 3.72e-69 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mupr8878g00008 AP2 4.6e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8878g00008 - - gmx:100784305 315.849