Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8869g00002 ATGCTGACCAAATTGGCTGAACCCCCCATAAACTCAAAGGGACTTGTCGGAATTAGTGAAAAAATTGTTGATACAGAATCATTGATACGCAAAGAGCCAAAAGACACTCGTCTTGTTGGAATTTGGGGCATGGGCGGTATCGGCAAGACAACCCTTGCAGAAGAAATATTTAATAAACTACGGTTTGAATACGAAGGTTGCTGTTTTTTAGCCAATGAAAGAGAACAATCAAGCAGACGTGAACTAATTTCTTTGAAAGAAGAAATATTTTCTAAACTATTAGGAAATGTTGTGAAAATTGACACCCCAAATTCGTTGCCCCATGAAATTATTAGAAGAATTCGTCGTGTGAAGATTCTTTTTGTTCTTGATGATGTCAATAATCCCGATCACCTAGAAAAATTACTGGGACCTCTTCATAATTTTGGATCAGGTAGCAGAATAATTGTAACAAAAACTAGAGATGAACAAGTACTTACGGCTAATAAAGCTGATGAAATATACCAGCTTAGAGAATTCAGTTTTGATAATGCACTTGAACTTTTCAGTTTGAATGCCTTTAACCAAAGTGATCATCAAAGGGATTACGATGTGCTATCAGAAAGGGTGGTTACTTATGCTAAAGGCGTTCCATTAGTTCTTAAAGTTTTGGGTCATCTTCTTTGTGGAAAAAATAAGGAAGTATGGGAAAGTGAGCTAGACAAGCTTAAAAATATGCCTCTTACAAAAGTAAATGTGAGTCATCTAAAATCTTTATTGAAAGATGGTGAACGCGATAATTCAGTGATTGTTGGATTAGAAAGGCTGAAAGATAAAGCTCTTATAACTTTTTCTGAGGATAATTTTGTATGTATGCATGATAGTATACAAGAAATGGCTTGGGAGATTGTTGGTCGCGAAAACCCCAAAAAACCCACTTGGTTGTGGGATCCCGATGACATTTGTGAAGAATTGCAAAATGATAAGAATTTGGTGAATATAAAAGAACTTGATCTCAGTTACTCCAAGATGTTAAAGGAGCTGCCAGATTTATCAAAAGCCACAAATTTTGAAGTACTGCTTCTCATGGGTTGTTCTATGTTGACTAGTGTGCATCCATCTATTTTCTCTTTGGGAAAACTTGAGAAATTGAACCTTTTGTACTGTGAATCCCTTACCACACTCACAAGCGATTCCCATGCATGTAACCTTAGTTATCTCAACCTTGATTGTTGTAAGAATCTTACCAAATTCTCATTGATGTCAGAGAATATGAAAGAACTGATATTAGGAAGTACAAAGATCAAAACACTTCCCTCATCATTTGGACATCAAAGCAAGCTTAAATGGCTAGATATATACGGAAGTGATATTGAGAGGTTACCTTCATCCTTGAACAATCTCACACAACTGCTATATATATATTTAAGATCTTGCAAGGAGCTTCAAACAATACCAGAGCTTCCTCTGTTGCTTGAAACTCTAGATACCCAAGGATGCACATCACTTCAGACTATTGGAAAACTTCCTCCATCACTCAAAACTCTATATGTCCATTACTGCATATCACTTCAGACTCTACCAGAGCTTCCTCGTTTCCTTGAAACTCTATGCATCCAAGGCTGCAAATCACTTCAAACTCTACCAGAGCTTCCCCATTTCCATGAAACTCTAAACACTCAAGACTGCAAATCACTTCAGACTCTGTCAAAGCTTCCCCAACCTCCGTCCCTTAAACTCTAA 1722 0.3705 MLTKLAEPPINSKGLVGISEKIVDTESLIRKEPKDTRLVGIWGMGGIGKTTLAEEIFNKLRFEYEGCCFLANEREQSSRRELISLKEEIFSKLLGNVVKIDTPNSLPHEIIRRIRRVKILFVLDDVNNPDHLEKLLGPLHNFGSGSRIIVTKTRDEQVLTANKADEIYQLREFSFDNALELFSLNAFNQSDHQRDYDVLSERVVTYAKGVPLVLKVLGHLLCGKNKEVWESELDKLKNMPLTKVNVSHLKSLLKDGERDNSVIVGLERLKDKALITFSEDNFVCMHDSIQEMAWEIVGRENPKKPTWLWDPDDICEELQNDKNLVNIKELDLSYSKMLKELPDLSKATNFEVLLLMGCSMLTSVHPSIFSLGKLEKLNLLYCESLTTLTSDSHACNLSYLNLDCCKNLTKFSLMSENMKELILGSTKIKTLPSSFGHQSKLKWLDIYGSDIERLPSSLNNLTQLLYIYLRSCKELQTIPELPLLLETLDTQGCTSLQTIGKLPPSLKTLYVHYCISLQTLPELPRFLETLCIQGCKSLQTLPELPHFHETLNTQDCKSLQTLSKLPQPPSLKL 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8869g00002 573 Gene3D Ribonuclease Inhibitor 311 393 IPR032675 -
Mupr8869g00002 573 Pfam NB-ARC domain 26 251 IPR002182 GO:0043531
Mupr8869g00002 573 Gene3D Ribonuclease Inhibitor 394 572 IPR032675 -
Mupr8869g00002 573 Gene3D - 5 167 IPR027417 -
Mupr8869g00002 573 PRINTS Disease resistance protein signature 322 338 - -
Mupr8869g00002 573 PRINTS Disease resistance protein signature 38 53 - -
Mupr8869g00002 573 PRINTS Disease resistance protein signature 113 127 - -
Mupr8869g00002 573 PRINTS Disease resistance protein signature 207 221 - -
Mupr8869g00002 573 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 324 412 IPR044974 GO:0006952
Mupr8869g00002 573 SMART LRR_bac_2 438 457 - -
Mupr8869g00002 573 SMART LRR_bac_2 324 344 - -
Mupr8869g00002 573 SMART LRR_bac_2 524 544 - -
Mupr8869g00002 573 SMART LRR_bac_2 503 523 - -
Mupr8869g00002 573 Gene3D - 173 251 IPR042197 -
Mupr8869g00002 573 SUPERFAMILY L domain-like 317 572 - -
Mupr8869g00002 573 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 243 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8869g00002 Mupr-Chr8869 18046 20307 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8869g00002 16 552 WRKY Transcription Factor Family AT5G45050 29.167 3.58e-41 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8869g00002 - - ccaj:109788083 505.753