Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8858g00001 ATGGAACCTGTAGGAGCCTTCCCTGATGGAGAATGGGATTGCTTTCGCCGAATGTTCGCCAGTGAGGAGCATGATTTCACACTGCAGTTTCCACTTCTGCTTGATGGTGCTGATGAATTGAACATTGTGACACAACAACAACAACTCATGTTTTGTGCTGGTGAAAATGAGCGTATGTTTTATTCTTTAGATGCTCACAACTCAAATTTGCAGTATATTTCTCAAGAGAGTAGTTATAGTAGTAATTGTAGTGGCGATGACACTGTCTTCATTGACAATCCGGGTAGCGCAAACTATTATTTTGGTTACCCTGATCACGTGCTAGCAAATAATGCATGTGTGGATGAGAGACATTTCTCCTCTTTTGTCCCATCGCTGATTACTGACATTGTAACGGAAGATAGTGTCAAGTTGTGTGAAGATGTGGGAAGTGAGACATTGCAAAATTCTCAATACAATCAAATGGAAGCTATTGTTTTTCCCACCAAGCAGTTGCAGCTCAAAAGGAAGCTTGATGTGCCTGCTCAGGATAAAATCAACAACAGATCTGAGAATCACAAGAAAAAGCCACGTCTTTTAAAAGAGGGGCAAGGATGCATGAAAAACGCATGGTCCAAGAAGAATCAGAAAGATGGGGAAGAAGCAGAAGAGACTAATGCAGGATCAGATGGACAAAGCTCTAGTAGTAACATGTCAGAGGATGATAACGCTTGTAAGGAAAATAGTGGAGGAGCTACTTCGGGCTCTAAATCTCTTCTCAACTCAAATGGGAAGACAAGAGCAAGTAGGGGATCAGCAACAGATCCCCAGAGCCTGTATGCAAGAAAAAGAAGAGAGAGAATAAACGAGCGATTAAGAATCCTACAGAATCTTGTCCCAAACGGAACCAAGGTTGATATAAGTACAATGCTTGAAGAGGCAGTCAATTACGTGAAGTTCTTGCAGCTCCAGATCAAGCTTTTAAGCTCCGATGATCTATGGATGTACGCTCCGCTTGCTTATAATGGACTTGACATTGGATTCAATCTCAACTCGAAGAATTCCCTACCACTCTGA 1056 0.4195 MEPVGAFPDGEWDCFRRMFASEEHDFTLQFPLLLDGADELNIVTQQQQLMFCAGENERMFYSLDAHNSNLQYISQESSYSSNCSGDDTVFIDNPGSANYYFGYPDHVLANNACVDERHFSSFVPSLITDIVTEDSVKLCEDVGSETLQNSQYNQMEAIVFPTKQLQLKRKLDVPAQDKINNRSENHKKKPRLLKEGQGCMKNAWSKKNQKDGEEAEETNAGSDGQSSSSNMSEDDNACKENSGGATSGSKSLLNSNGKTRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVNYVKFLQLQIKLLSSDDLWMYAPLAYNGLDIGFNLNSKNSLPL 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8858g00001 351 MobiDBLite consensus disorder prediction 219 269 - -
Mupr8858g00001 351 Pfam Helix-loop-helix DNA-binding domain 275 315 IPR011598 GO:0046983
Mupr8858g00001 351 MobiDBLite consensus disorder prediction 174 195 - -
Mupr8858g00001 351 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 265 314 IPR011598 GO:0046983
Mupr8858g00001 351 SMART finulus 271 320 IPR011598 GO:0046983
Mupr8858g00001 351 FunFam Basic helix-loop-helix transcription factor 266 323 - -
Mupr8858g00001 351 Gene3D - 267 323 IPR036638 GO:0046983
Mupr8858g00001 351 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 265 329 IPR036638 GO:0046983
Mupr8858g00001 351 CDD bHLH_AtIND_like 266 328 - -
Mupr8858g00001 351 MobiDBLite consensus disorder prediction 174 277 - -
Mupr8858g00001 351 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 105 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8858g00001 Mupr-Chr8858 3722 5697 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8858g00001 10 341 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 38.630 3.74e-55 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr8858g00001 HLH 1.2e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8858g00001 - - gmx:100797500 502.671