Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8857g00004 ATGGAGGGGATGTCTCCTAATTCATGTGCAAGGCCAGTTTTAGAGAAGAAAGCAAGGCCACAAGAGCAACTGAATTGTCCAAGGTGCAATTCCACCAACACAAAGTTTTGTTACTACAACAACTACAGCCTCACACAACCAAGATACTTCTGCAAGACTTGTAGAAGGTATTGGACAGAAGGAGGGTCTCTGAGAAATGTTCCAGTTGGAGGTGGTTCAAGAAAGAACAAGAAGGTGACTTCAGCAACATCATCATCATCATCAAAGGTTCCAGACCTAAACCCCCCAAACCTCTCAGTCTCAGCCCTCTCTCCCCAAAACCCTAAAATAATGCATGGAGGCCAAGATCTCAACTTGGCTTTCCCACCCATTCATGGCATGTCCCCTTATGTTGAGATGCAAAACAGTGACACCACTCACCACCACCAAACATCTCCTTCTTGTTCTGCTCCTCCACCTTCTCTTTCAGCTCTTGAGCTTCTTAGGTCCAGCATGGCATCTAGGGGTTTGAACCCTTATGCTCCTTCTCCCTTGATGCCAAACTCAGCAAATAACAATGCCCTCTATCCATCAGGGTTTCCCATGCAAGAAGCCAAACCAGGCCTTGCCTTTTCTTCAGTTGATGGAATGGGAAACAATAGGTCATATGATCATCATCAGGTCCAAGAGAGGGGTGGCAGAGTTTTGTTCCCTTTTGGAGATGTGAAGCAGCTTTCTACTTCAGGTGCTGAAGTGGAACACAACAAAGAACAAGGGAACTCAACTGGATATTGGACTGGAATGATTGACATAGAAGAAGAGGCACATGCAATTCCTTTATTCATGAATGAATTCTTCTATGAGGAGAAGGAGATGGCCTTGATTTGTACTGGGGCCCTCAAACATTCCCTTGGGGCAAGTGGAAACTATTTCTCCACTGGCCAGGTCAATGGATTGGCTTCACATGTGGATGATTAA 957 0.4545 MEGMSPNSCARPVLEKKARPQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKKVTSATSSSSSKVPDLNPPNLSVSALSPQNPKIMHGGQDLNLAFPPIHGMSPYVEMQNSDTTHHHQTSPSCSAPPPSLSALELLRSSMASRGLNPYAPSPLMPNSANNNALYPSGFPMQEAKPGLAFSSVDGMGNNRSYDHHQVQERGGRVLFPFGDVKQLSTSGAEVEHNKEQGNSTGYWTGMIDIEEEAHAIPLFMNEFFYEEKEMALICTGALKHSLGASGNYFSTGQVNGLASHVDD 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8857g00004 318 MobiDBLite consensus disorder prediction 76 105 - -
Mupr8857g00004 318 MobiDBLite consensus disorder prediction 1 21 - -
Mupr8857g00004 318 MobiDBLite consensus disorder prediction 135 152 - -
Mupr8857g00004 318 Pfam Dof domain, zinc finger 22 78 IPR003851 GO:0003677|GO:0006355
Mupr8857g00004 318 MobiDBLite consensus disorder prediction 65 105 - -
Mupr8857g00004 318 ProSitePatterns Zinc finger Dof-type signature. 26 62 IPR003851 GO:0003677|GO:0006355
Mupr8857g00004 318 MobiDBLite consensus disorder prediction 135 155 - -
Mupr8857g00004 318 ProSiteProfiles Zinc finger Dof-type profile. 24 78 IPR003851 GO:0003677|GO:0006355
Mupr8857g00004 318 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 15 164 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8857g00004 Mupr-Chr8857 31262 33151 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8857g00004 16 262 C2C2-Dof Transcription Factor Family AT3G61850 49.071 5.92e-65 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mupr8857g00004 zf-Dof 3.9e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8857g00004 - - gmx:778110 412.149