Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8846g00002 ATGGTAAGAGCTCCATTCTATGACAAAAATGGAGTGAAGAAAGGTGCATGGAGTAGAGAAGAAGACGAGAGGTTAAGAGCTTATGTTCAGAGATATGGTCATTCTAATTGGCGTCAACTCCCCAAGTTTGCAGGTTTAGCAAGGTGTGGGAAAAGTTGCAGACTTCGTTGGTTGAATTACTTAAGACCAAATCTAAAACACGGGAACTACACCCCAGAGGAAGAACAAATGATCATCAAATTACGTCAAGAATTTGGAAATAAAATATCTAAGTGTCCTACGAAGAGAAACTAG 294 0.3946 MVRAPFYDKNGVKKGAWSREEDERLRAYVQRYGHSNWRQLPKFAGLARCGKSCRLRWLNYLRPNLKHGNYTPEEEQMIIKLRQEFGNKISKCPTKRN 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8846g00002 97 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mupr8846g00002 97 FunFam Transcription factor RAX3 7 67 - -
Mupr8846g00002 97 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 91 - -
Mupr8846g00002 97 SUPERFAMILY Homeodomain-like 15 90 IPR009057 -
Mupr8846g00002 97 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mupr8846g00002 97 CDD SANT 16 61 IPR001005 -
Mupr8846g00002 97 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Mupr8846g00002 97 SMART sant 13 63 IPR001005 -
Mupr8846g00002 97 Gene3D - 13 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8846g00002 Mupr-Chr8846 14468 14954 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8846g00002 1 95 MYB Transcription Factor Family AT2G31180 61.053 1.71e-38 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mupr8846g00002 Myb_DNA-binding 8.8e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8846g00002 K09422 - gmx:100776043 175.637