Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8814g00001 ATGCCAGACCTTCATTTTATTCTTCTTTCTGGAACTTGTGTATCTACTGCCAAAGGTCTGAAAGTTGAACCAATGGATTGTACAGCTGCAAGAAAGACACAAAAGGCTGACAGAGAAAAGTTAAGGAGGGATCGACTCAATGAACAGTTTGTCCAACTGGGCAACATTTTAGACCCTGATAGGCCCAAAAATGACAAAGCAACCATTCTAGGTGATACGGTTCAATTGCTAAAGGACCTTTCTTCTCATGTTAGTAAACTTAAAGATGAATATGCTACACTAAATGAAGAATCTCGTGAGTTGGCTCAGGAGAAAAACGATCTCAGAGGAGAGAAGGCTTCTCTTAAATCGGATATTGAGAAGTTGAATAATCAGTATCAGCAACAGCTCAGGACTATGTCTCCTCCATGGACTCCAATGGATCATTCAGTAATGCTAGCTCCACCGTCATATCCATATCCAGTGCCAATGCCACCTGCTCCTATTTCCATGCAGCCATACCCCTTCTTTGCTAATCAACATTCTGCAATCATCCATAACCCTTGTTCAACATTTGTTCCTTATTTAGTCCCCAATACCCTTGTTGAACAGCAATCCACCCAGCAGATATCCCCACCGATTTATCCAGGTTTCCAGTCCAATGTGTTAGCAAAACAAGAGTCCCAAAACAAATCATCCAAGGAGAGCAAGGCTGAAAAACATGAGGATTCTAATGATGTCACTATGGACCTGACTCCCGGGTCTTCTGCAGACCAGGATTTGTCACCTGGACAAAGAAAATCTAGAAAGTTGTTAAGGAAGGAAAGCACTTGTACTGGTGTGAGTTGGCTAGATAGGTGTTCTTCATCTTGTAGCATTCAGGATAGTTCATCAAGTAGTGTAATTCACGAGCACAAAGACTAA 903 0.4186 MPDLHFILLSGTCVSTAKGLKVEPMDCTAARKTQKADREKLRRDRLNEQFVQLGNILDPDRPKNDKATILGDTVQLLKDLSSHVSKLKDEYATLNEESRELAQEKNDLRGEKASLKSDIEKLNNQYQQQLRTMSPPWTPMDHSVMLAPPSYPYPVPMPPAPISMQPYPFFANQHSAIIHNPCSTFVPYLVPNTLVEQQSTQQISPPIYPGFQSNVLAKQESQNKSSKESKAEKHEDSNDVTMDLTPGSSADQDLSPGQRKSRKLLRKESTCTGVSWLDRCSSSCSIQDSSSSSVIHEHKD 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8814g00001 300 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 30 99 IPR036638 GO:0046983
Mupr8814g00001 300 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 30 80 IPR011598 GO:0046983
Mupr8814g00001 300 PANTHER TRANSCRIPTION FACTOR BHLH121 15 298 IPR044579 GO:0003700|GO:0006879
Mupr8814g00001 300 Gene3D - 29 113 IPR036638 GO:0046983
Mupr8814g00001 300 Coils Coil 29 49 - -
Mupr8814g00001 300 MobiDBLite consensus disorder prediction 223 240 - -
Mupr8814g00001 300 CDD bHLH_AtILR3_like 35 109 - -
Mupr8814g00001 300 Coils Coil 77 132 - -
Mupr8814g00001 300 Pfam Helix-loop-helix DNA-binding domain 31 80 IPR011598 GO:0046983
Mupr8814g00001 300 SMART finulus 36 86 IPR011598 GO:0046983
Mupr8814g00001 300 MobiDBLite consensus disorder prediction 241 255 - -
Mupr8814g00001 300 MobiDBLite consensus disorder prediction 217 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8814g00001 Mupr-Chr8814 15982 18557 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8814g00001 4 253 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G19860 56.154 1.67e-81 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr8814g00001 HLH 5e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8814g00001 - - gmx:100817000 392.119