Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8811g00002 ATGGCAACAGCGAGGACCGTTAAGGATGTTTCGCCTCACGATTTCGTGAAGGCTTACTCCGCCCACCTCAAGCGTTCTGGCAAGGTTATTGGTTCCCTTCTAATGGCTAATTTGTATGTGGTTGTTCAACAGATGGAGCTTCCTGAGTGGACAGATATAGTAAAAACTGCAAAATTTAAGGAGCTGGCTCCATATGATCCTGACTGGTACTATGTTAGAGCTGCATCAATGGCAAGAAAGATCTATTTGAGAGGTGGTCTTGGTGTCGGTGCTTTCCAGAGGATCTATGGTGGAAGCAAGAGAAACGGAAGCCGGCCCCCACATTTTTGCAAGAGCAGCGGTGCTATTGCCAGACACATTCTGCAACAGTTGCAAAACATGAACATTGTTGAGGTTGATACAAAAGGAGGTAGGAAAATCACTTCTAGTGGGCGAAGAGATCTTGACCAAGTTGCTGGGCGAATTGTGTTTTTTGCATCCAAAGTGGATGATGCATCTTAA 501 0.4551 MATARTVKDVSPHDFVKAYSAHLKRSGKVIGSLLMANLYVVVQQMELPEWTDIVKTAKFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFQRIYGGSKRNGSRPPHFCKSSGAIARHILQQLQNMNIVEVDTKGGRKITSSGRRDLDQVAGRIVFFASKVDDAS 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8811g00002 166 SMART Ribosomal_S19e_2 6 158 IPR001266 GO:0003735|GO:0005840|GO:0006412
Mupr8811g00002 166 SUPERFAMILY "Winged helix" DNA-binding domain 6 156 IPR036390 -
Mupr8811g00002 166 FunFam 40S ribosomal protein S19 2 158 - -
Mupr8811g00002 166 ProSitePatterns Ribosomal protein S19e signature. 106 125 IPR018277 GO:0003735|GO:0005840|GO:0006412
Mupr8811g00002 166 Gene3D - 1 158 IPR036388 -
Mupr8811g00002 166 Pfam Ribosomal protein S19e 6 155 IPR001266 GO:0003735|GO:0005840|GO:0006412
Mupr8811g00002 166 PANTHER 40S RIBOSOMAL PROTEIN S19 2 158 IPR001266 GO:0003735|GO:0005840|GO:0006412
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8811g00002 1 155 Cytoplasmic Ribosomal Protein Gene Family AT3G02080 78.710 8.76e-90 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8811g00002 K02966 - gmx:100805469 271.552