Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr880g00001 ATGGATGTCTATGATTTGTCTATGGATTTTGATCCTACCCTAAGGGATCATCAAGAAAGTGAGGAAGAAGATGCTATTACTTGGAGAAGTTGGAGTCCTACCCCATCTTTGAACTCAGATTTGTCATCAAATCTAAAACCTCTTACCTTGCCTCAACAAGGCATGGAAATTGAAAACCAAGTGAGTCTTCCACATATGTTGGAGGCCCTTGGAGAAGCCATATATCAAGGGAAGAAGGCACTAGAAGAAGTGATCTTGAGATGCATGAGGCAAAAAGTTAGTCCAGTTGGTGAACCTCTTGAACGCCTTGCATTCTATTTGTGCCAAGAGGGTTGTTATCTCACACAAGAGGCTTCCAACAACTTTGAGGCAGCGTTTAAGGCTTTCTACCAAGGCCTCCCACATGGAAAAGTTGCTCACTTTGTGGCTAATTATGCAATTCTTGAAGCTTTGCCACATGACTCTGAAGTCATACACATAGTGGATTTTGATATGGGAGAAGGGTCTCAATGGCCTCCATTGATTGAGGCCATTGCAACCCTGAACAAAACATTAAAGTTGACATCAATCAAATGGGGAAAGGAAGGTTCTGGCGGTGTTTCCTCTCCTTGGAGGTTTGAGGAAATTAGAAGGGAGCTCTTTGAGCATGCTAGATCTTGTGGGGTGAAGTTGATGGTGGTGGAGAAGGGAAAGGAGGAAGTGGTTAGTGAGCTCAAGAAAATGAACAAAAGGGGTGGAATTGGAAGGAGAGAATTTTGGGCCTTCAATTGCATGGTGGGTCTTCCACATATGGGGAGAGGAAGTAGTATAAGGCATGTCATGGAGTTTCTAAATTTGATCAAGAGTTGTGGCAGCAGAGGAATTGTCACTTTTGGGGATGGGAGAGCTTGTGAGAAGTTGGAAAATGACTTGGAATTCAAGTCATTCTTTGAGAGGCATTTGGTGCATTACATGGCCTTGTTAGAGTCAATTGAATCACATTTTCCAAACCATTTCTCACATGCAAGAACTGCCATGGAGTGCCTATTTGTGGCACCTTATATCTGTTCTCGTGCTTGGTTGCAAAAATGGGAAGAGATCAAAGAGGAGTCCCATTTTCAGGAAGAGATTGGCTTAGAGGGATGCAGATTTAGCAATGCAATTTTAATGGAAGTGAGAGAGATGTTGAGTAGATGTGAAGGTTCATATGAGGCCAAGACTGAAGGACAGAATGACAATCAATTGCTTTTGAAATGGAAAGAAACCCAGCTAGTAAGAGTTTCAACTTGGAGAAATTAA 1278 0.4241 MDVYDLSMDFDPTLRDHQESEEEDAITWRSWSPTPSLNSDLSSNLKPLTLPQQGMEIENQVSLPHMLEALGEAIYQGKKALEEVILRCMRQKVSPVGEPLERLAFYLCQEGCYLTQEASNNFEAAFKAFYQGLPHGKVAHFVANYAILEALPHDSEVIHIVDFDMGEGSQWPPLIEAIATLNKTLKLTSIKWGKEGSGGVSSPWRFEEIRRELFEHARSCGVKLMVVEKGKEEVVSELKKMNKRGGIGRREFWAFNCMVGLPHMGRGSSIRHVMEFLNLIKSCGSRGIVTFGDGRACEKLENDLEFKSFFERHLVHYMALLESIESHFPNHFSHARTAMECLFVAPYICSRAWLQKWEEIKEESHFQEEIGLEGCRFSNAILMEVREMLSRCEGSYEAKTEGQNDNQLLLKWKETQLVRVSTWRN 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr880g00001 425 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 53 418 IPR005202 -
Mupr880g00001 425 ProSiteProfiles GRAS family profile. 54 424 IPR005202 -
Mupr880g00001 425 Pfam GRAS domain family 65 424 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr880g00001 Mupr-Chr880 1585 2862 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr880g00001 61 424 GRAS Transcription Factor Family AT4G00150 25.000 5.04e-15 75.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mupr880g00001 GRAS 4.3e-41 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr880g00001 - - gmx:100791800 656.366