Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8802g00001 ATGTACACTCATTGTGCATCGTTGCCACCCTTTATGCCCACCTACCAAACACGGACGCTCGAGATTCAAAACGACCCCAACACCCTCCATTATATAATACCCTCTTCTCTCTCCCTCAACCACAGCAGCACTCTCACCAACGGTTTACTAATCAATCCCTCTCCTCATTCCTTAATACCTCGAACCGCTTCCACTTCCACTTCCACCATCAACATGGCCGCAACTAATGTCCACGTGGCAAACCGTGACGCCGCTTTCTGCTTAAGTGGAGCCACTCTCAACAATGGGAGTGCCGACCCCTTGAACTGGGGCGCCGCCGCGGAGTCCATGACTGGAAGCCACCTCGACGAGGTCAAGCGCATGGTGGCGGAGTTCCGGAAGCCGGTCGTCCGTCTTGGCGGTGAGACGCTCACCATCTCGCAGGTGGCGGCCATCGCCACCAGCCACCAAGGAGTCAAGGTGGAGCTTGCGGAGTCCTCCAGGGCTGCCGTTAAGGCCAGCAGTGACTGGGTCATGGACAGCATGAACAAGGGCACCGACAGCTACGGTATCACCACCGGTTTCGGCGCCACCTCCCACCGCCGAACCAAACAAGGTGGCGCCCTGCAGAAGGAACTCATTAGGTTTTTGAATTCTGGAATATTTGGCAAGGGTACAGAGATTGATTGTACCCTACCCCACACAGCAACCAGAGCAGCTATGCTAGTGAGAATCAACACTCTTCTCCAAGGGTACTCAGGCATTAGGTTTGAAATTTTGGAGGCCATCACGAAGCTTTTGAACAGCAAGATTACCCCATGCTTGCCACTGAGGGGTACAATTACAGCATCTGGTGATCTTATTCCTTTGTCTTACATTGCCGGTTTGCTAACTGGTAGACCAAACTCCAAGGCTGTTGGACCCTCTGGGGAGATTCTGAATGCCAAGGAAGCTTTTGAATTGGCCAACATTGGTTCTGAGTTCTTTGAGTTGCAACCCAAGGAAGGTCTTGCCCTTGTGAATGGCACTGCTGTTGGTTCTGGCTTGGCTGCCATTGTCCTCTTTGAGGCAAACATCTTGGCTGTCTTGTCTGAAGTTATTTCAGCTATTTTTGCTGAAGTGATGCAAGGGAAGCCTGAGTTCACTGACTATTTGACTCATAAGCTAAAACACCACCCTGGACAGATTGAGGCTGCTGCTATCATGGAACACATTTTGGATGGAAGCTCCTATATCAAAGCAGCCAAGAAGTTGCATGAGATTGATCCTTTGCAAAAGCCTAAACAAGATCGTTATGCCCTTAGAACTTCACCCCAATGGCTTGGTCCTCAAATTGAAGTCATCAGGTTTTCAACCAAGTCAATTGAGAGGGAGATTAACTCTGTCAATGACAACCCATTGATTGATGTTTCAAGGAACAAGGCTGTGCATGGTGGTAACTTCCAAGGAACTCCAATTGGAGTCTCCATGGATAACACCCGTTTGGCTATTGCATCAATTGGCAAACTCATGTTTGCTCAATTCTCTGAGCTTATCTATGAACATTACAACAATGGCTTGCCCTCAAATCTCACTGCTGGCAGAAACCCCAGCTTGGATTATGGCCTCAAGGGATCTGAAATCGCCATGGCAGCTTACTGCTCAGAACTCCAATACTTGGCTAACCCTGTAACCACCCACGTCCAAAGCGCCGAGCAACACAACCAAGATGTCAACTCTCTGGGGTTGATTTCATCTAGGAAAACAAATGAGGCTGTTGAGATCCTCAAGCTCATGTCTGCCACTTACCTCATTGCACTTTGCCAAGCCATTGACTTGAGGCACTTGGAGGAGAATTTGAAGAATACTGTGAAGAACGTTGTGAGCCAAGTTGCCAAGAGGACTCTAACCACAGGTGTCAACGGAGAACTTCACCCTTCAAGATTCTGTGAGAAGGACTTGCTGAAAGTTGTTGATAGGGAGAGCACATTTACCTACATTGATGACCCCTGCAGTGCCACATACCCTTTGATGCAAAAACTAAGGCAAGTGCTTGTGGACCATGCACTGGCCAATGTTGAGGGAGAGAAGAACTTGAACACATCAATCTTCCAAAAGATTGAAACATTTGAGGAGGAATTGAAGACCCTCTTGCCTAAGGAGGTGGAAGGTGCAAGGGTTGCATTTGAGAATGGCCAATTTGCAATTCCCAACAAGATCAAGGAATGCAGGTCTTACCCCTTGTACAAGTTTGTGAGGGAGGAGTTGGGAACAGCCTTGCTAACTGGAGAAAAGGTTACCTCACCGGGTGAAGAGTTTGACAAAGTGTTCACTGCAATTTGCCATGGGAAAATCATTGATCCTCTTATGGAATGCCTTGGAGAGTGGAATGGTGCTCCTCTTCCAATCTGTTAA 2373 0.4846 MYTHCASLPPFMPTYQTRTLEIQNDPNTLHYIIPSSLSLNHSSTLTNGLLINPSPHSLIPRTASTSTSTINMAATNVHVANRDAAFCLSGATLNNGSADPLNWGAAAESMTGSHLDEVKRMVAEFRKPVVRLGGETLTISQVAAIATSHQGVKVELAESSRAAVKASSDWVMDSMNKGTDSYGITTGFGATSHRRTKQGGALQKELIRFLNSGIFGKGTEIDCTLPHTATRAAMLVRINTLLQGYSGIRFEILEAITKLLNSKITPCLPLRGTITASGDLIPLSYIAGLLTGRPNSKAVGPSGEILNAKEAFELANIGSEFFELQPKEGLALVNGTAVGSGLAAIVLFEANILAVLSEVISAIFAEVMQGKPEFTDYLTHKLKHHPGQIEAAAIMEHILDGSSYIKAAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFSTKSIEREINSVNDNPLIDVSRNKAVHGGNFQGTPIGVSMDNTRLAIASIGKLMFAQFSELIYEHYNNGLPSNLTAGRNPSLDYGLKGSEIAMAAYCSELQYLANPVTTHVQSAEQHNQDVNSLGLISSRKTNEAVEILKLMSATYLIALCQAIDLRHLEENLKNTVKNVVSQVAKRTLTTGVNGELHPSRFCEKDLLKVVDRESTFTYIDDPCSATYPLMQKLRQVLVDHALANVEGEKNLNTSIFQKIETFEEELKTLLPKEVEGARVAFENGQFAIPNKIKECRSYPLYKFVREELGTALLTGEKVTSPGEEFDKVFTAICHGKIIDPLMECLGEWNGAPLPIC 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8802g00001 790 CDD PAL-HAL 135 600 IPR001106 -
Mupr8802g00001 790 Gene3D Fumarase/aspartase (Central domain) 337 785 - -
Mupr8802g00001 790 Gene3D - 603 724 IPR023144 -
Mupr8802g00001 790 PANTHER HISTIDINE AMMONIA-LYASE 93 790 IPR001106 -
Mupr8802g00001 790 FunFam Phenylalanine ammonia-lyase 337 645 - -
Mupr8802g00001 790 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 272 288 IPR022313 GO:0016841
Mupr8802g00001 790 Gene3D - 91 336 IPR024083 -
Mupr8802g00001 790 NCBIfam phenylalanine ammonia-lyase 99 779 IPR005922 GO:0005737|GO:0006559|GO:0016841
Mupr8802g00001 790 FunFam Phenylalanine ammonia-lyase 603 724 - -
Mupr8802g00001 790 SUPERFAMILY L-aspartase-like 99 790 IPR008948 GO:0003824
Mupr8802g00001 790 Pfam Aromatic amino acid lyase 137 617 IPR001106 -
Mupr8802g00001 790 FunFam Phenylalanine ammonia-lyase 91 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8802g00001 Mupr-Chr8802 13035 16851 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8802g00001 83 790 Monolignol Biosynthesis Gene Families AT2G37040 81.857 0.0 1228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8802g00001 K10775 - gmx:100803857 1269.22