Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8801g00003 ATGAAGAGAGAGAGAGGAAACGGTGATGTGGGCATTAGTGGACGTTGTCGTTTTGTGTATGCAACAAATCTTTTCATCGTCGTTAATTGTAAAACTTGCATTGCTTCTGTCCTCGTTCACACTGGTAACTCCAATTCCTTACTCACCAAGTCAAATGAGAGGCCCGATGAACGCCACGTGTTCAGATCTCCTTCGAGGCTTATTTCCCACCAATCTCGAATACCTATTTTACCCTTCGCTCACCATCCCCACGCGTTTGACACGCTCTACCGCGTGATTTCGTTGAAATCCGAGGCTAAGACCACAGTACCTTGTATTCAGTGCATATACGAGGAATTTATATTCGCAATTCACAAACTATGTGCTAATACACGTAACAAAAAACGACTCACCCACCTTCGCTCTCTTTTCACTTTCTCAGCAACTTGCTTTACCCGTGACGACGGAGAACTAAAAAAGAAGCTAAAATCCCCAGAATCCTCCGATTCCCACTTATTTATCTCAAAGATTTTTCCTTTCTCTCTCTTCGGCTTTCTGGGTACTGCAGAAACGCGCTCAACTTTGATGGGTGCCGTGGTCGAGTGTTACCCGCCGCCGCGCACGGCGGTGCTGTCCCTCAACACCTTGCCGTTAGGCTTCCGTTTTCGTCCCACTGATGAAGAGCTTATTGACTACTACCTGCGCTCCAAGATCAACGGAAATGGCGACGACGTTTGGGTTATCCGTGAAATTGATGTCTGCAAATGGGAGCCTTGGGATTTGCCTGATTTGTCAGTGGTACGGAACAAGGATCCAGAGTGGTTCTTCTTCTGTCCACAGGACCGCAAGTATCCTAACGGGCACAGGTTGAACCGGGCTACGAATCATGGGTATTGGAAGGCAACGGGGAAGGATCGTAGGATTAAGTCTGGCTCCACCTTGATTGGAATGAAGAAGACTCTGGTTTTCTACACTGGTCGCGCTCCAAAGGGGAAGAGGACCTATTGGGTTATGCATGAGTACAGGCCTACCCTGCAGGAGCTTGATGGTACCAATCCTGGACAGAATCCATATGTCCTTTGTCGATTATTTAAGAAACAAGATGAGAGTCTTGAAGGTTCAAATTGTGAAGGAGTGGAGGGGACTGCTTCAACTCCTATTACTGCTGTCGATTACTCTCCAGACGAAATACCATCTGGTTCAGCTCTGGTTCCAGCATCTTCCTCACAGGTTACTGATGATAAGCCTCCAGCAGTCAGTGCCGAGAATGAGGAAGCAATGTCCACCATTATAACTCCAGTTGATTTCTATAGTGATGGATGTGATGCTCATGATGCACCAAATAAAATTGTAGAACCAGCTGCAGAGGAGGATCCGCCGTTTAATGTGGACATATTTTTTGACCCAACAAATCCACACTTGGATGACAAATTATTCTCCCCTGCCCATGCGCACTTCCCATCAGATATTTATTGTCAACCAGAACTTCTGTATGGTACAAATGACAATATTTCTCACTTGTTTGACTCGGTTATTAATTGGGATGCATTCTCCAATGATACCTGCAGTCTAGAACAAAGCTCATCCATCCATAATGTTAAGGACAATGGATCAGGCAGTGACTCAGATGTGGAAATGGCCAATATGACGCATCTGCAAGCATCACATGATTATCCTAATGAGGCAGTTGAGCAGAGGAGCAATGAAGGATTATTTCACAACAATCTCCAGATGGATTTCTCAAATGATGGTAGTATGGGCCAAGTGCACAATGTGGTCAACGAATGTGAGCAACCAAGAAACTTTGATGCACTTGTTAATGGTGATACTGGAATCAGAATAAGGACTCGTCAAGGACGAAATGAACAGCCAAACATGAACCCTATGCTACAATCGCAAGGCTTTGCCCCAAGGAGAATACGACTGGGAGTTGTTAGGCGTCCACTTGGTTCCAACGACACAGCAAAAGTTGGGAGTTGTGCTTCTGCCCCAGAAGACCATAATTCAAAAACCATCATTTCCGGGGAGAGAAAAGCTTCAGAAAACCATGCTACAGATGAGAGTTGCGGCGTTATTAATGAAGTTGATGAATCAGAGAAGGCATCTCCTGAGTGTGCAGCCATTTCAAGAAACATGTGTGAGCAACCTGTTGCAATTGCAAAATCCATCTCAGGGTGGAAACACCTTCTATTTAGCAGAAGGGGCCGCAACACGTCAAAGGTTTCCTCTAGCCGTGCCATGTGGTCTTATGTTCTTGCAGTGTCTGCCATTGTATTGGTCTCAGTAATACTCCTTAACATGGTCTCTAAGACACGTGTTGCCCCGGTATTGTGA 2313 0.4561 MKRERGNGDVGISGRCRFVYATNLFIVVNCKTCIASVLVHTGNSNSLLTKSNERPDERHVFRSPSRLISHQSRIPILPFAHHPHAFDTLYRVISLKSEAKTTVPCIQCIYEEFIFAIHKLCANTRNKKRLTHLRSLFTFSATCFTRDDGELKKKLKSPESSDSHLFISKIFPFSLFGFLGTAETRSTLMGAVVECYPPPRTAVLSLNTLPLGFRFRPTDEELIDYYLRSKINGNGDDVWVIREIDVCKWEPWDLPDLSVVRNKDPEWFFFCPQDRKYPNGHRLNRATNHGYWKATGKDRRIKSGSTLIGMKKTLVFYTGRAPKGKRTYWVMHEYRPTLQELDGTNPGQNPYVLCRLFKKQDESLEGSNCEGVEGTASTPITAVDYSPDEIPSGSALVPASSSQVTDDKPPAVSAENEEAMSTIITPVDFYSDGCDAHDAPNKIVEPAAEEDPPFNVDIFFDPTNPHLDDKLFSPAHAHFPSDIYCQPELLYGTNDNISHLFDSVINWDAFSNDTCSLEQSSSIHNVKDNGSGSDSDVEMANMTHLQASHDYPNEAVEQRSNEGLFHNNLQMDFSNDGSMGQVHNVVNECEQPRNFDALVNGDTGIRIRTRQGRNEQPNMNPMLQSQGFAPRRIRLGVVRRPLGSNDTAKVGSCASAPEDHNSKTIISGERKASENHATDESCGVINEVDESEKASPECAAISRNMCEQPVAIAKSISGWKHLLFSRRGRNTSKVSSSRAMWSYVLAVSAIVLVSVILLNMVSKTRVAPVL 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8801g00003 770 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 208 516 - -
Mupr8801g00003 770 FunFam Nac domain-containing protein 86 218 362 - -
Mupr8801g00003 770 MobiDBLite consensus disorder prediction 395 409 - -
Mupr8801g00003 770 Pfam No apical meristem (NAM) protein 210 335 IPR003441 GO:0003677|GO:0006355
Mupr8801g00003 770 SUPERFAMILY NAC domain 202 359 IPR036093 GO:0003677|GO:0006355
Mupr8801g00003 770 MobiDBLite consensus disorder prediction 366 412 - -
Mupr8801g00003 770 ProSiteProfiles NAC domain profile. 209 359 IPR003441 GO:0003677|GO:0006355
Mupr8801g00003 770 Gene3D NAC domain 218 363 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8801g00003 Mupr-Chr8801 14824 19559 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8801g00003 202 635 NAC Transcription Factor Family AT4G35580 41.957 6.34e-94 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mupr8801g00003 NAM 3.5e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8801g00003 - - gmx:100778903 876.315