Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8800g00001 ATGCAGAAACGGAGGGCGGGGAGGAAGAAGTTCCACGAGACACGTCACCCCGTTTACAAAGGCGTGAGGCAGAGGAACGGCAAGTGGGTCTGCGAGCTACGACAACCTAACAACAAAAACGCGCGTGTCTGGCTCGGAACCTTCGCGCACCCCGACATGGCTGCTGTAGCGTACGATGTTGCTGCTTTGGCTTTCAAAGGTGACACTGCTTCCTTGAACTTCCCTCACACTGCTACCTCCTTGCCGCGCCTCAACTCGCGAACGTGTTCCGTCAGAGCCATTCAGTTCGCCGCAACGCAAGCCGCGAACAAACAAGCCCTTTCTAAAGTTCAAAGAGAGGCTTCCTCAGAGGGAGGTTCGGGAAGCATCTGCTGTGATGAAGATGCTTCAGAATTATCATCCGAGGGAGGTTCTGGAGGGTTCTTTTGGGATGAAGAGGAGGTGTTTAACATGCCGGGGTTGTTGAACAGCATGGCGGAAGCGTTGATTATCACACCGCCCGCTTTGCAGAAAGGGTTCAATTGGGTTGGTGGGGAAACCACTGTGGATTTGACTCTATGGGGAACTAATTATTACTCAAGTAAACCCTAA 591 0.5262 MQKRRAGRKKFHETRHPVYKGVRQRNGKWVCELRQPNNKNARVWLGTFAHPDMAAVAYDVAALAFKGDTASLNFPHTATSLPRLNSRTCSVRAIQFAATQAANKQALSKVQREASSEGGSGSICCDEDASELSSEGGSGGFFWDEEEVFNMPGLLNSMAEALIITPPALQKGFNWVGGETTVDLTLWGTNYYSSKP 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8800g00001 196 Gene3D AP2/ERF domain 18 77 IPR036955 GO:0003700|GO:0006355
Mupr8800g00001 196 SUPERFAMILY DNA-binding domain 18 76 IPR016177 GO:0003677
Mupr8800g00001 196 Pfam AP2 domain 17 67 IPR001471 GO:0003700|GO:0006355
Mupr8800g00001 196 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 2 187 IPR045277 GO:0003700
Mupr8800g00001 196 ProSiteProfiles AP2/ERF domain profile. 18 75 IPR001471 GO:0003700|GO:0006355
Mupr8800g00001 196 CDD AP2 19 77 IPR001471 GO:0003700|GO:0006355
Mupr8800g00001 196 SMART rav1_2 18 81 IPR001471 GO:0003700|GO:0006355
Mupr8800g00001 196 PRINTS Ethylene responsive element binding protein signature 57 77 IPR001471 GO:0003700|GO:0006355
Mupr8800g00001 196 PRINTS Ethylene responsive element binding protein signature 19 30 IPR001471 GO:0003700|GO:0006355
Mupr8800g00001 196 MobiDBLite consensus disorder prediction 112 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8800g00001 Mupr-Chr8800 5073 5915 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8800g00001 3 187 AP2-EREBP Transcription Factor Family AT5G51990 45.078 1.27e-42 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mupr8800g00001 AP2 7e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8800g00001 - - gmx:100778541 304.293