Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8799g00003 ATGAAGCCCTTTTGCAGATTCTTGATTCTTCTATCGCTGTTATCTCTGGTGGAATGTTCATGCAACAGTGAAGAGCGGGACTTGGTGTCAAAGGCTTTCAAATCAGTCTCGGGCTTCAACGCTTCCTCCTGGTTCCGAAGCAACTGTTCACAAACTCACATCACCAGAATAGAGTTTCCATCTCAAAACCTGAGCGGCACAATCTCATGGAACTATCTGAGGAACATATCCAACTTGCAGGTTCTCGATCTCTCTGGGAACTCCCTACAAGGCCACGTGCCAAGCTGGGTTTGGTCAATTTCAACCCTATTGGAAATGAACCTCTCGAGAAACAGGCTCGGAGGGAGCATCAAAACAGAAAACACCTCGTTTTCCTTTTCATTTTCATCCATTCAAACGCTAAACCTCTCCCACAACAGGTTCACCAATTCAATCCAACTTTCTGGCTTCCAAAACCTTAAAATCCTCGACCTATCCCACAACCACCTGGTAACACTCCCCTCCGGGTTCCAAAACCTCACTAAGCTACAACACCTCGACCTCTCAAGCTGCAATGTGGAAAGCAACATAAAACCCGTTTCCTCTCTACACTCACTTCACTACTTGGACTTATCAAACAACACCTTCACCGGTGATTTCCCTTCTGATTTCCCTCCACTCGACACCCTTGAATTTCTCAACATCTCACTCAACAACTTCACCTCATCAATTAGTCTAAACAAGTTCAAGAGATTCGGTAAATCGGCATTCGTCCACGCTGGCAACAACTTCACCTACGACAACACCACGTCCAAAACGCCCAACAACAGTAAAAATTCAACACAGACCATCCACAAGAAGCGAAAACCCAAAACGGTGATTCTTGCAGCGTCTTCTGCGTCAGCAGCGCTTGTCCTAATTCTGTTGTCCATTTGGGTACTCCGCATTATTCAAAAGAGGAAGCAGCAACGCGCCAAGAGGAACAAATGGGCGATTTCCATGCCGGTTCCACATGGGATGAACGTGATCGCGAGCAAGGTGGAGAAATCAGGGCCGTTCGCGTTCGAGACGGAGTCTGGGTCAACGTGGGTGGCTGACCTGAAGGAACCGTCTTCCGCGCCGGTGGTCATGTTCGAGAAGCCCTTGATGAATCTTAGCTTCAAGGACCTCATTGTTGCCACGTCACACTTCGGGAAGGACTCGCTGCTCGCGGAGGGAAGGTGTGGGCCCGTCTACAGAGCCGTGCTGCCTGGGGACCTCCACGTGGCAATCAAGGTCCTCGAACACGCCAGAGGCGTTGATCCTGATGACTTGGTTGCCACGTTCATTGACCTCTCCAGGCTCAAGCACCCCAACTTGTTGCCCCTCTCCGGTTATTGCATTGCAGGTAAGGAGAAACTGGTACTGTACGAGTACATGGCAAATGGCGACCTGGGAAGGTGGCTACACGAGCTTCCAACTGGGGATACCAACGTGGAGGACTGGACAGGCGACACGTGGGAGATTCAAAACGGAGTGGTGGACGGATCCCCAGAAAAGATGGGGTGGCTGACACGACACCGTATCGCGGTGGGAATAGCGCGTGGCCTCGCGTATCTGCACCACGCCGGTTCGAAACCCGTGGTGCACGGCCACCTCGTCACCTCAAACATTTTACTCGCCGACGATTTCGAGCCCCGGATATCCGATTTCGGGTTGCGGTCCGACCCGAACCCGAACGGAGGCCCGGAGGCTGACGTATATTGCTTCGGGGCGGCGCTGATGGAGCTGCTGACGGGGAAGGAGAGCACGGCGGAGATGGTGGCGGCGGCAAGGAAGGCGGTGAGGGAGGGGCACGGCGTTAGGGTGCTGGACGAGAGGATGCGACTCGGTGGTGACTCGGTGGCGAGTGAGATGGTGGAGACTCTCCGAGTGGCTTTTTTGTGTACGGCGGAGTCGCCTTCGAAGAGGCCCACCATGCAGCAGGTTTTGGGTTTGCTCAAAGACATTCGTCCTCATCAGCAACAACTCGTCCCGAGTTGA 2001 0.5287 MKPFCRFLILLSLLSLVECSCNSEERDLVSKAFKSVSGFNASSWFRSNCSQTHITRIEFPSQNLSGTISWNYLRNISNLQVLDLSGNSLQGHVPSWVWSISTLLEMNLSRNRLGGSIKTENTSFSFSFSSIQTLNLSHNRFTNSIQLSGFQNLKILDLSHNHLVTLPSGFQNLTKLQHLDLSSCNVESNIKPVSSLHSLHYLDLSNNTFTGDFPSDFPPLDTLEFLNISLNNFTSSISLNKFKRFGKSAFVHAGNNFTYDNTTSKTPNNSKNSTQTIHKKRKPKTVILAASSASAALVLILLSIWVLRIIQKRKQQRAKRNKWAISMPVPHGMNVIASKVEKSGPFAFETESGSTWVADLKEPSSAPVVMFEKPLMNLSFKDLIVATSHFGKDSLLAEGRCGPVYRAVLPGDLHVAIKVLEHARGVDPDDLVATFIDLSRLKHPNLLPLSGYCIAGKEKLVLYEYMANGDLGRWLHELPTGDTNVEDWTGDTWEIQNGVVDGSPEKMGWLTRHRIAVGIARGLAYLHHAGSKPVVHGHLVTSNILLADDFEPRISDFGLRSDPNPNGGPEADVYCFGAALMELLTGKESTAEMVAAARKAVREGHGVRVLDERMRLGGDSVASEMVETLRVAFLCTAESPSKRPTMQQVLGLLKDIRPHQQQLVPS 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8799g00003 666 SMART LRR_typ_2 150 172 IPR003591 -
Mupr8799g00003 666 SMART LRR_typ_2 76 100 IPR003591 -
Mupr8799g00003 666 SMART LRR_typ_2 173 197 IPR003591 -
Mupr8799g00003 666 Gene3D Phosphorylase Kinase; domain 1 350 465 - -
Mupr8799g00003 666 Gene3D Ribonuclease Inhibitor 125 295 IPR032675 -
Mupr8799g00003 666 Pfam Protein tyrosine and serine/threonine kinase 394 562 IPR001245 GO:0004672|GO:0006468
Mupr8799g00003 666 ProSiteProfiles Leucine-rich repeat profile. 152 174 IPR001611 GO:0005515
Mupr8799g00003 666 FunFam Putative LRR receptor-like serine/threonine-protein kinase 351 465 - -
Mupr8799g00003 666 FunFam Calmodulin-binding receptor kinase CaMRLK 129 239 - -
Mupr8799g00003 666 ProSiteProfiles Protein kinase domain profile. 390 664 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr8799g00003 666 Gene3D Ribonuclease Inhibitor 18 124 IPR032675 -
Mupr8799g00003 666 SUPERFAMILY L domain-like 40 237 - -
Mupr8799g00003 666 Pfam Leucine Rich Repeat 78 94 IPR001611 GO:0005515
Mupr8799g00003 666 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 571 657 - -
Mupr8799g00003 666 PRINTS Leucine-rich repeat signature 150 163 - -
Mupr8799g00003 666 PRINTS Leucine-rich repeat signature 79 92 - -
Mupr8799g00003 666 SUPERFAMILY Protein kinase-like (PK-like) 367 657 IPR011009 -
Mupr8799g00003 666 Pfam Leucine rich repeat 130 185 IPR001611 GO:0005515
Mupr8799g00003 666 Gene3D Transferase(Phosphotransferase) domain 1 466 566 - -
Mupr8799g00003 666 Gene3D Transferase(Phosphotransferase) domain 1 567 664 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8799g00003 Mupr-Chr8799 18337 20895 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8799g00003 54 656 Receptor kinase-like Gene Family AT5G07280 31.250 2.05e-72 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Mupr8799g00003 PK_Tyr_Ser-Thr 4.6e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8799g00003 - - gmx:100788556 1035.02