Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8790g00001 ATGTCAAAATTGCAAAAAAGTTCAAAATGGGCTGTTAGCAGTACCGGTCACCTCTTGGACAATATATTCCAATACAAATTGACAACACAAAATACGTCCAGGCTTTCTATGATAAATGCTGAAACTGAACTATATATGAATGCACGTATTTCTCCTCTTTCTCTAACATACTATGGATTTTGTTTGGGAAATGGAAATTATACAGTAAAACTCCACTTTGCTGAGATAATGTTCTCTGATGACAACACATTCAACAGCTTAGGGAGGCGTGTCTTTGACATTTACATCCAGGGAGAACGTGTATTAGAGGATTTCAACATAGCAAATGAAGCACAAGGGGTTGGAAAGGCACTTACAAAACAATTTCATGCTTATGTGAGTAATAATGCCTTAGAGATTCGATTCTCTTGGGCAGGAAAAGGGACAACTGGTATTCCACGTAGATCGGTATATGGTCCTCTTATTTCAGCAATATCGGTTACTTCAGAACTTAAGGATGTAGATACGAAAACTGGTTCATTTACCTTACGTCAAATCAAAGTAGCAACAAATAACTTTAGTATTTCCAATAAGGTTGGAGAAGGAGGGTTTGGTCCTGTATATAAGGGCATTTTATGGGATGGTACAATGATAGCAGTCAAGAAACTTTCATCTAAATCAAAACAAGGAAACCATGAGTTTATAAATGAGATAGGGTTGATCTCAGCTTTGCAACACCCTTACGTTGTTAAACTTTATGGTCGTGAAGAATCTTGTTTAAAATTGGATTGGCCAACAAGGCAGAAGATATGTGTTGGTATTGCTAGAGGATTGGCTTTCCTACATGAAGAATCAACATTGAAGATTGTTCATAGAGATATCAAGGCCACTAATGTATTGCTTGACAAAGAACTAAACCCAAAAATATCTGATTTTGGTTTAGCCAAGCTTGATGAGGAAGATAACACTCATATAAGCACCCGAATAGCTGGGACCTATGGATATATGGCTCCTGAATATGCAATGCTTGGTCATTTGACTGAAAAAGCAGATGCACAAATGTTGAAAGACGAAGGTAAATTAATGGAGTTAGTTGATGAAAGATTGGGTTCAAATTTCAATGAAGAAGAGGCCTTAGACTACTTCGCTATTGACCATTATCCCACTAACCTTAGTTCATCATACTAG 1167 0.3702 MSKLQKSSKWAVSSTGHLLDNIFQYKLTTQNTSRLSMINAETELYMNARISPLSLTYYGFCLGNGNYTVKLHFAEIMFSDDNTFNSLGRRVFDIYIQGERVLEDFNIANEAQGVGKALTKQFHAYVSNNALEIRFSWAGKGTTGIPRRSVYGPLISAISVTSELKDVDTKTGSFTLRQIKVATNNFSISNKVGEGGFGPVYKGILWDGTMIAVKKLSSKSKQGNHEFINEIGLISALQHPYVVKLYGREESCLKLDWPTRQKICVGIARGLAFLHEESTLKIVHRDIKATNVLLDKELNPKISDFGLAKLDEEDNTHISTRIAGTYGYMAPEYAMLGHLTEKADAQMLKDEGKLMELVDERLGSNFNEEEALDYFAIDHYPTNLSSSY 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8790g00001 388 Gene3D Transferase(Phosphotransferase) domain 1 250 378 - -
Mupr8790g00001 388 SUPERFAMILY Protein kinase-like (PK-like) 172 344 IPR011009 -
Mupr8790g00001 388 Gene3D Phosphorylase Kinase; domain 1 162 249 - -
Mupr8790g00001 388 Pfam Malectin domain 32 158 IPR021720 -
Mupr8790g00001 388 ProSitePatterns Serine/Threonine protein kinases active-site signature. 282 294 IPR008271 GO:0004672|GO:0006468
Mupr8790g00001 388 Pfam Protein kinase domain 260 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr8790g00001 388 Pfam Protein kinase domain 187 247 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr8790g00001 388 FunFam Os07g0541700 protein 243 325 - -
Mupr8790g00001 388 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 1 163 - -
Mupr8790g00001 388 SMART serkin_6 186 375 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr8790g00001 388 ProSiteProfiles Protein kinase domain profile. 186 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr8790g00001 388 Gene3D - 6 161 - -
Mupr8790g00001 388 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 12 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8790g00001 Mupr-Chr8790 7441 10747 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8790g00001 1 387 Receptor kinase-like Gene Family AT1G07650 49.698 4.36e-150 442
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mupr8790g00001 Malectin 2.9e-38 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8790g00001 - - qsa:O6P43_001072 514.998