Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8776g00002 ATGGCAAGGAAGAGAAAGGTTGTTGAAGTAGAGGAAGAGAGAAACCTGTGTGAGGGAAGCATGGGTTGGGATGAGATGATGAAACAAGCTGCAGCACTTGGAGGAGTCCAAAGAGCAAGGAAGAGGTTTGTTGGGGTAAGGCAAAGGCCATCAGGTAGATGGGTAGCTGAGATAAAAGACACCATTCAGAAGATAAGAGTGTGGTTGGGGACTTTTGACACAGCTGAGGAAGCTGCTAGAGCCTATGATGAGGCTGCTTGCTTGCTTCGTGGCGCCAACACAAGGACAAACTTCTGGCCTTGCTCTCAATCCTCCTCAACTCCAGCTCTCTCTTCAAAGATCACCAATCTCCTCCTTCAAAGGCTTAAGGAAAGGAACAACAACAACAACAACACTTGCTCCTCCACCTCACTTCTCATCAACCACCAACAAATGCCACAACAACAACAAGTTGATGCATATGCAGAAGGATCAGCACAATTTTCAATTGACCAATTCACTGATTTCCTCAATGACCCTGAAGACTATAGCACAAGCAACAGTGACTTGATCAACAACCATGCACAAATTGACTACATTACTAGTAGTTTTGAGTCATGTTTGAATGAGAAAGATGACTGCAGGGGGACAGAAATGGATGTGCAATACAAATCCAGCAATGTGACACCACAGACTTCAAGTGATGACAGCAATTCAGGAGTGGAGAGAGAGGAGGAGGACAGTGAAGAAGAAGGCACTGATTTGGGTGTCCATGATTTTAGGTTTCTGGACAACATAGCACCACCTAGTTACTATTCTCCTTTTGAGATGGCTGAAGAGATGGAGGAGCCTGTGGAGCCTGAGAACTATGGTGATGAGCCTTCAATGATTAGGGCTGTCATGAAGAGAATGAAATATGAAAGGAAGTTCTCAGCTTCTCTCTATGCCTTTAATGGGATACCTGAGTGCTTGAAGTTGAAACTGGAATCAGGAAACATGAATGGAACAATGGATACGAATAAGGAGGAGAGTGAATACATGAAGGGAACAATGGATAGGAAACAGGAACAACACCAACAAACATCAACTCACATGGATTCTTCTTCTTCATCATCTACTGTTGATGGGGAACTGTTACTTTGGAATTCACTTGATCTTCCTCCCATTTGCTTCGTTAACTTACTAGAAAACGCTTCATTCAATTAG 1185 0.4363 MARKRKVVEVEEERNLCEGSMGWDEMMKQAAALGGVQRARKRFVGVRQRPSGRWVAEIKDTIQKIRVWLGTFDTAEEAARAYDEAACLLRGANTRTNFWPCSQSSSTPALSSKITNLLLQRLKERNNNNNNTCSSTSLLINHQQMPQQQQVDAYAEGSAQFSIDQFTDFLNDPEDYSTSNSDLINNHAQIDYITSSFESCLNEKDDCRGTEMDVQYKSSNVTPQTSSDDSNSGVEREEEDSEEEGTDLGVHDFRFLDNIAPPSYYSPFEMAEEMEEPVEPENYGDEPSMIRAVMKRMKYERKFSASLYAFNGIPECLKLKLESGNMNGTMDTNKEESEYMKGTMDRKQEQHQQTSTHMDSSSSSSTVDGELLLWNSLDLPPICFVNLLENASFN 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8776g00002 394 Gene3D AP2/ERF domain 41 99 IPR036955 GO:0003700|GO:0006355
Mupr8776g00002 394 MobiDBLite consensus disorder prediction 214 230 - -
Mupr8776g00002 394 CDD AP2 41 98 IPR001471 GO:0003700|GO:0006355
Mupr8776g00002 394 SMART rav1_2 42 105 IPR001471 GO:0003700|GO:0006355
Mupr8776g00002 394 MobiDBLite consensus disorder prediction 214 253 - -
Mupr8776g00002 394 MobiDBLite consensus disorder prediction 327 365 - -
Mupr8776g00002 394 PRINTS Ethylene responsive element binding protein signature 65 81 IPR001471 GO:0003700|GO:0006355
Mupr8776g00002 394 PRINTS Ethylene responsive element binding protein signature 43 54 IPR001471 GO:0003700|GO:0006355
Mupr8776g00002 394 FunFam ethylene-responsive transcription factor RAP2-11 41 100 - -
Mupr8776g00002 394 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 17 315 - -
Mupr8776g00002 394 MobiDBLite consensus disorder prediction 334 353 - -
Mupr8776g00002 394 SUPERFAMILY DNA-binding domain 42 99 IPR016177 GO:0003677
Mupr8776g00002 394 ProSiteProfiles AP2/ERF domain profile. 42 99 IPR001471 GO:0003700|GO:0006355
Mupr8776g00002 394 Pfam AP2 domain 42 91 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8776g00002 Mupr-Chr8776 23857 25041 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8776g00002 40 118 AP2-EREBP Transcription Factor Family AT5G19790 73.418 1.04e-32 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Mupr8776g00002 AP2 7.6e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8776g00002 K09286 - gmx:100786711 561.222