Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8758g00003 ATGGAGGGAAGAGAGAGTTTTGGTGTTGTGGTGGGTGACGAAGCTCCAGAGAGCTTCCACGTGGCTCCTAGAATTGAGAACAACTTGGACTTTTCAAGGGCCACCGTGCCGGCGGCGTCGCCGGCGACGGAGGGGAAAAAGAAGAGAGGGAGGCCGAGAAAGTATGGGCCGGACGGCAAGGTGGCGTTGGGGGTGGTGACGGCGCTTTCTCCGATGCCGATTTCGTCGTCGATTCCGTTGACCGAGTTCTCGGCTTGGAAGAGGGGTAGAGGGAGGCCTATTGAATCTATGAAGAAGTCATCGTTTAAGTTTGAGGTTGAAAGCCCTGGACCAGGTGAGGGAATAGCATACTCAGTTGGTGCCAATTTCACACCACATGTGCTCACAGTAAATGCTGGCGAGGACGTCACTATGAAGATTATGTCCTTTTCTCAACAATCCCGAGCTATATGCATTCTCTCTGCAACTGGGACAATTTCAAATGTTACACTTCGTCAACCGTCTTCTTGTGGGGGTACTTTAACATATGAGGGACGGTTTGAGATTCTTTCCTTGTCTGGTTCCTTTATGCCAACTGAGAATGGAGTTACAAGAAGCAGATCTGGTGGGATGAGTATCTCTTTGGCTGGTCCAGATGGTCGAGTAATGGGGGGTGGACTTGCTGGTTTGTTGGTAGCTGCTGGTCCAGTGCAGGTTGTGGTGGCCAGTTTTCTTCCTGGTCACCAGTTGGAGCATAAAGCCAAGAAGCAAAGGGTGGAGCATATATCAACTTTTACCTCTACACCTGTTAATCTTATCAGTAATGAGCAAATAAAAGTCAGTTTTGGTGGAGTAAAGCCTATTATGACACCTGCTGCTTTTCAAGAAGAGAATATTGCTTCTTTTAACAATGGTCAAGACTCTAGGAATTCATCTGCTGATGATCAAGATCCTTTACCTGAAAAGGAGTCTAACCTAAGCCAATCAAATGCTGAGGCTGCATGCTAA 987 0.4792 MEGRESFGVVVGDEAPESFHVAPRIENNLDFSRATVPAASPATEGKKKRGRPRKYGPDGKVALGVVTALSPMPISSSIPLTEFSAWKRGRGRPIESMKKSSFKFEVESPGPGEGIAYSVGANFTPHVLTVNAGEDVTMKIMSFSQQSRAICILSATGTISNVTLRQPSSCGGTLTYEGRFEILSLSGSFMPTENGVTRSRSGGMSISLAGPDGRVMGGGLAGLLVAAGPVQVVVASFLPGHQLEHKAKKQRVEHISTFTSTPVNLISNEQIKVSFGGVKPIMTPAAFQEENIASFNNGQDSRNSSADDQDPLPEKESNLSQSNAEAAC 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8758g00003 328 Gene3D - 125 257 - -
Mupr8758g00003 328 CDD DUF296 124 237 IPR005175 -
Mupr8758g00003 328 Pfam Plants and Prokaryotes Conserved (PCC) domain 125 237 IPR005175 -
Mupr8758g00003 328 SUPERFAMILY AF0104/ALDC/Ptd012-like 122 239 - -
Mupr8758g00003 328 MobiDBLite consensus disorder prediction 30 58 - -
Mupr8758g00003 328 FunFam AT-hook motif nuclear-localized protein 1-like 125 255 - -
Mupr8758g00003 328 ProSiteProfiles PPC domain profile profile. 120 261 IPR005175 -
Mupr8758g00003 328 MobiDBLite consensus disorder prediction 294 328 - -
Mupr8758g00003 328 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 30 309 IPR039605 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8758g00003 Mupr-Chr8758 17057 22349 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8758g00003 46 297 AT-hook Motif Nuclear Localized (AHL) Family AT5G62260 55.903 1.59e-87 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8758g00003 - - gmx:100776862 570.081