Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8732g00001 ATGAGAAAAGACAAGGCTGAGAAGAAAACGCCGCCGCCGTTGAAAATCATATTGGGGGCCCAGGCACTGCATAATACATTGCATGCAACAACAGAAGGGAAGAAGGACCTCAACCCAAGTCAGCCAAACACAGCACAAAGAGTTTCAGAATCCTTTTTTGCCCTTTCCATGTCAGTAACCCTAAACGGTAACAGTACAGTACACTCTGCCTCCGCTGAATTTCAGACAAACAGTGTCATTCACCCTCGCCCAATCAACCATCAGATGGCGGCATCATCTTCCTCAGCATCGCTCTTTGGATTTAGAGAAGAGGATCAGAACCAGATGAAGCAACAGCATTCCTTGACACCATCATCATCAACAACTCCAGCTGCACCACCACCCCAGAAGAAAAAGAGAAACCAACCTGGAACACCATGCAACTCTCTCAATTCGATTTCCAATCCAGATGCGGAGGTGATAGCACTATCTCCCAAGACCCTAATGGCAACAAACAGGTTTATATGTGAGGTGTGCAACAAAGGGTTCCAAAGGGAGCAAAACCTACAGCTACACAGAAGAGGACACAACCTGCCTTGGAAGCTTAAGCAGAAGACTACAAAAGAGCCAAAGAGAAAGGTTTATCTGTGTCCTGAGCCCACATGCGTCCACCATGACCCGTCAAGGGCTCTGGGAGACCTCACAGGGATCAAGAAACACTACTCTCGCAAACATGGCGAGAAGAAGTGGAAGTGTGATAAGTGCTCTAAGAAATATGCTGTTCAATCAGATTGGAAAGCCCATTCCAAGACTTGTGGCACCAGAGAATACAGATGTGACTGTGGCACCCTCTTCTCCAGGCGAGACAGTTTCATCACCCACAGGGCCTTCTGCGATGCACTGGCTCAGGAGAGTGCAAGACAGCCACCAAACCTTAGCGGCGGAATTGGAAGCCACCTGTACGGAGCTACGAGCATGGCCTTAAACCTATCTCAGGTGGGCTCTCAGATCTCAAACATGCAAGATCCCAACGCCCAACAAACCGAACTACTGCGCCTCGGCGGCGCCGCCACTCGAACCGGCCAATTCGACCACATCCTCGGTTCGCCCTTCCGATCCTCGCAGCAACCGTTTTTTATCTCCGAACCGAACCAAAACTACCACCCGGACCAGCAAGGGTTGGTTCCAAACAAACCCTTCCAACAAGGATTGATGCAATTGTCTGATCACCACAACGGCATGAACAATTCCCCTTTCAACCTTCCCTTCCTTTCGAGCAATAGCAACACCAACACCAGCAATGTAACGTTCTCCGAACACTTCAACAATGCGAACGGAGGAGGGAATAATAACAACAACAACAACGAGGGCACGAACTTCTTCACAACTTCAAGCGCCCCTTCTCTCTTCAGCAACAGCAACAACGGTGGAAATGCCATGTGTCACATGTCTGCAACGGCGTTGCTTCAGAAAGCGGCGCAAATGGGTGCAACTTCGAGCAACAGCACCGCTTCGCTGTTGAAAAGCTTCGGAAGCGCGTCCTCCAGCAGCGGCTCAAAATCTGAACACAGGCCACTTGTTGCAAACGCAAACTACGGTGCCATTTTTGGAGGGAACGAGCAGAGTAATAGTAACCTCCAAGACTTGATGAACTCGTTCGCTGTTAGTGGAAACTCTTCCATTTTCGAAGGTGGGTCTTCGGGAGGGTTTTCTGTTGCGGGCTTTGAAGCATATGATCATAGCAATAGGGAGGCCAAAGTGCACGCCATGAGTGGGTCCGATAGGCTCACCCGCGATTTTCTGGGAGTTGGTCAGATAGTGCGAGGCATGAGTGGAAGTGGAGGGGTTTCGCAGAGAGAACAACATGGCTTCAACTTGACTTCTTTGGACCCAGAAACAAATAATAATAATAATCATAACAACAATAATGCTGCGCCGTCAGGTCAATCTTTTGGAGGTGGTGGAGGGAATTTTCAGTGA 1959 0.4931 MRKDKAEKKTPPPLKIILGAQALHNTLHATTEGKKDLNPSQPNTAQRVSESFFALSMSVTLNGNSTVHSASAEFQTNSVIHPRPINHQMAASSSSASLFGFREEDQNQMKQQHSLTPSSSTTPAAPPPQKKKRNQPGTPCNSLNSISNPDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKTTKEPKRKVYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGEKKWKCDKCSKKYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQESARQPPNLSGGIGSHLYGATSMALNLSQVGSQISNMQDPNAQQTELLRLGGAATRTGQFDHILGSPFRSSQQPFFISEPNQNYHPDQQGLVPNKPFQQGLMQLSDHHNGMNNSPFNLPFLSSNSNTNTSNVTFSEHFNNANGGGNNNNNNNEGTNFFTTSSAPSLFSNSNNGGNAMCHMSATALLQKAAQMGATSSNSTASLLKSFGSASSSSGSKSEHRPLVANANYGAIFGGNEQSNSNLQDLMNSFAVSGNSSIFEGGSSGGFSVAGFEAYDHSNREAKVHAMSGSDRLTRDFLGVGQIVRGMSGSGGVSQREQHGFNLTSLDPETNNNNNHNNNNAAPSGQSFGGGGGNFQ 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8732g00001 652 MobiDBLite consensus disorder prediction 619 652 - -
Mupr8732g00001 652 ProSitePatterns Zinc finger C2H2 type domain signature. 169 189 IPR013087 -
Mupr8732g00001 652 Pfam Zinc-finger double-stranded RNA-binding 167 189 IPR022755 -
Mupr8732g00001 652 FunFam protein indeterminate-domain 5, chloroplastic-like 221 300 - -
Mupr8732g00001 652 SUPERFAMILY beta-beta-alpha zinc fingers 166 263 IPR036236 -
Mupr8732g00001 652 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 106 620 IPR031140 -
Mupr8732g00001 652 MobiDBLite consensus disorder prediction 105 147 - -
Mupr8732g00001 652 SMART c2h2final6 208 238 IPR013087 -
Mupr8732g00001 652 SMART c2h2final6 243 263 IPR013087 -
Mupr8732g00001 652 SMART c2h2final6 167 189 IPR013087 -
Mupr8732g00001 652 MobiDBLite consensus disorder prediction 105 120 - -
Mupr8732g00001 652 Gene3D Classic Zinc Finger 147 215 - -
Mupr8732g00001 652 ProSiteProfiles Zinc finger C2H2 type domain profile. 167 189 IPR013087 -
Mupr8732g00001 652 Gene3D Classic Zinc Finger 221 300 - -
Mupr8732g00001 652 FunFam protein indeterminate-domain 12-like 146 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8732g00001 Mupr-Chr8732 1156 8614 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8732g00001 129 608 IDZ Gene Family AT2G02070 51.679 8.69e-142 424
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mupr8732g00001 zf-C2H2_jaz 4.1e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8732g00001 K25870 - gmx:100799389 731.865