Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8727g00004 ATGGACAGGGTCGTCGGCGGGAAGTTTAAGGTTGGTCGGAAAATCGGGAGCGGCTCTTTCGCCTCAAATATGGACAACTCTGAGATTGTCGCGGTCAAGATGGAAAGCAAGAAGACCAAACATCCACAATTATTGTATGAAGCAAAGTTATATAGTTTTCTTCAAGGAGAAAGTGGTGTTCCAAGTATGAAGTGGTGTGGTACCGATGGAGACAATAATGTTCTAGTTATTGATCTTCTGGGCCGGAGTCTTGAAGACTTTTTTGTCTATTGTGGGAGGAAGTTTTCATTAAAAACAGTTTTAATGTTGGCCGATCAGATGCTGACAAGAATAGAGTACTTGCATTCCAAGGGGTTTTTGCATAGAGACATCAAACCAGATAACTTCCTTATGGGTCTTGGAAGGAAATCAAATCAGGTTTATATCATTGATTTTGGACTTGCAAAAAGATATAGGGACCCTAACACAAACAAGCATATTCCTTACAGAGAGAATAAAAGCTTAACAGGAACTGCTCGTTATGCAAGTTGCAACACTCACATGGGAATTGAACAAAGTCGCCGCGATGATTTGGAGTCTCTTGGCTATGTTCTTATGTACTTTTTAAGAGGAAGCCTTCCTTGGCAGGGTCTGAAAGCTGCCACCAAAAAGGAAAAATATGACAATATTTGTGAGAAGAAATTAGCAACTCCCATTGAGATGCTTTGCAAGTCATATCCTGCGGAGTTCGCTACTTACTTTCATTACTGCCAATCTTTGGCATTTGATCAACACCCAGATTATGGATTCTTGAAGCGCCTGTTTCATGATTTGTTCAAAAGAGAAGGATATGATTCCGACTACATATTTGACTGGACCATCCTAAAATATCAGCAGGTGCAACAGACAAAGAAACAAAATCAATCATCTTCTTCAGCTGCAGTACCAAGCAGTCTAGAACCAGTAGTTGTGGAAAAGCATAAAGGAGCCAACGATTCAGCTCATGTTGCTGTAACAAAAATGTTAGCCAACCTTGAACGCCCAAGTGCACGTGTGCAGCCTAAGCCATGTAATGTTCGGAATCGGGATGCCAAGAATGAGACCGAGAAACATGGTGTGAAGAATAGTCCATCATCTACTTCATCCGCCATGCCCAAATCCTCTACAGAAAGTGTCTCAAAACCAGAAAGGCACATAGGAGCTTCAAACCTTGGTCGTGTATTTGGGAGTAATTCCCGTGTTTCAAGCAGCTGGATTCCTTCGCTACGCCGAATTTCTTCATCCAAATAG 1269 0.4177 MDRVVGGKFKVGRKIGSGSFASNMDNSEIVAVKMESKKTKHPQLLYEAKLYSFLQGESGVPSMKWCGTDGDNNVLVIDLLGRSLEDFFVYCGRKFSLKTVLMLADQMLTRIEYLHSKGFLHRDIKPDNFLMGLGRKSNQVYIIDFGLAKRYRDPNTNKHIPYRENKSLTGTARYASCNTHMGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAATKKEKYDNICEKKLATPIEMLCKSYPAEFATYFHYCQSLAFDQHPDYGFLKRLFHDLFKREGYDSDYIFDWTILKYQQVQQTKKQNQSSSSAAVPSSLEPVVVEKHKGANDSAHVAVTKMLANLERPSARVQPKPCNVRNRDAKNETEKHGVKNSPSSTSSAMPKSSTESVSKPERHIGASNLGRVFGSNSRVSSSWIPSLRRISSSK 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8727g00004 422 MobiDBLite consensus disorder prediction 338 422 - -
Mupr8727g00004 422 MobiDBLite consensus disorder prediction 398 422 - -
Mupr8727g00004 422 ProSiteProfiles Protein kinase domain profile. 9 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr8727g00004 422 MobiDBLite consensus disorder prediction 351 365 - -
Mupr8727g00004 422 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Mupr8727g00004 422 MobiDBLite consensus disorder prediction 366 389 - -
Mupr8727g00004 422 FunFam CK1 family protein kinase 1 326 - -
Mupr8727g00004 422 SMART serkin_6 9 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr8727g00004 422 SUPERFAMILY Protein kinase-like (PK-like) 4 285 IPR011009 -
Mupr8727g00004 422 Pfam Protein kinase domain 9 221 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr8727g00004 422 PANTHER CASEIN KINASE-RELATED 9 374 - -
Mupr8727g00004 422 Gene3D Transferase(Phosphotransferase) domain 1 1 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8727g00004 Mupr-Chr8727 21956 27643 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8727g00004 4 231 AGC Kinase Gene Family AT3G08720 26.337 3.06e-12 66.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Mupr8727g00004 Pkinase 6.2e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8727g00004 K08960 K08959 gmx:100792736 757.673