Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8724g00008 ATGAGAGGCCAATCGGTAACCATTGGAGACAAAACGTATGGACTAGATAAATGTCAGCAAAGCTTTTTAGAAATGGAAACAATTGAGGATTTAGATAATAACATGCAACTCCCCTATATCACACAAAATAAAACTACACTTTATATGCCTGATACTGAACTATATAAGAATGCACCCATTTCACCCATTTCTTTAACATATTATGGATTTTGCTTGAAGAATGGAAACTACAAAGTAAAGCTACACTTTGTAAAGATAATATTTACTGATGACAACACATATAGTAGCCTTGGGAGGCGGATATTTGACATTTACATTCAGCTGGCACAAAAGGATTTCAATATTACAAGTGAAGGAGTTGGTAAGGAAATTATAAAACCATTTGATGCTTATGTGAGTAGCAATGACTTAGAGATCCGATTCTATTGGCTGGAAAAGGGACAATTAATATCCCATATAAAACATTTTGTATCATTTGACACAAATAGCTCTTTGTGTAACAAGCATAACCCACAAGCAGCATACCTAAAGGAGTTAGTTGTTGTTGCAATTGTTACAAAAATTATTATTGGCATCCTATGTATTGTTAGCATACTTTGGTGGAAAGGTGTTTTGTTAAATGGCACAATAATAGCAGTCAAACAACTTTCATCTAAGTCCAAGCAAGGGAATTGTCAATTTGTAAATGAGATAGACATTATCTCAGTTTTACAACACCCTTATCTTGTTAAACTTTATGGTTGTTGTGTTGATGGAGATCAATTATTGTTGGTATATGAATATATGGAAAACAACAGCCTTGCATATACTTTATTTAGCCCAGAAGAATGTCTTATAAAATTGGATTGGCCAACAAGGTACAAGATTTGTGTTGGCATTGTTAGAGAACAATTTCCTTATGTGATTAAGCATAAGCAAGACAAGATGAATGTGGTGGTGGATGCTCTCTTAAGGAGATATGCCCTTATTGCCATGCTTGAGACTAAGTTGCTTGGACTTGATTACATAAAGGAATTGTATGAAAAGGACCTTGATTTTTGTGAGCCTTTTGCCATGTGTGTCCATGGACAAAAGCTATATGTGTCCATGAGCTCCATTTGGCAATTGCTTATGATGAAGGCACGTGAAGGTGGCCTTATGGGTCATTTTGGAGAACTTAAGACTTTTGACATTTTTAGTGAACATTTCTATTGGCCTCATATGATGAAAAAAGTCCATAACATATGTGTGAAATATTTAACTTGCAAATTAACAAAGTCTAGAGTCTCTCCACATGGTCTATACACCCTAATCCCTATTCCCACTTCTCCT 1311 0.3501 MRGQSVTIGDKTYGLDKCQQSFLEMETIEDLDNNMQLPYITQNKTTLYMPDTELYKNAPISPISLTYYGFCLKNGNYKVKLHFVKIIFTDDNTYSSLGRRIFDIYIQLAQKDFNITSEGVGKEIIKPFDAYVSSNDLEIRFYWLEKGQLISHIKHFVSFDTNSSLCNKHNPQAAYLKELVVVAIVTKIIIGILCIVSILWWKGVLLNGTIIAVKQLSSKSKQGNCQFVNEIDIISVLQHPYLVKLYGCCVDGDQLLLVYEYMENNSLAYTLFSPEECLIKLDWPTRYKICVGIVREQFPYVIKHKQDKMNVVVDALLRRYALIAMLETKLLGLDYIKELYEKDLDFCEPFAMCVHGQKLYVSMSSIWQLLMMKAREGGLMGHFGELKTFDIFSEHFYWPHMMKKVHNICVKYLTCKLTKSRVSPHGLYTLIPIPTSP 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8724g00008 437 Pfam Protein tyrosine and serine/threonine kinase 209 275 IPR001245 GO:0004672|GO:0006468
Mupr8724g00008 437 Gene3D - 338 419 - -
Mupr8724g00008 437 SMART tyrkin_6 182 379 IPR020635 GO:0004713|GO:0006468
Mupr8724g00008 437 SUPERFAMILY Protein kinase-like (PK-like) 201 295 IPR011009 -
Mupr8724g00008 437 Pfam Malectin domain 34 150 IPR021720 -
Mupr8724g00008 437 Gene3D Phosphorylase Kinase; domain 1 200 263 - -
Mupr8724g00008 437 Gene3D - 3 160 - -
Mupr8724g00008 437 Pfam Integrase zinc binding domain 368 421 IPR041588 -
Mupr8724g00008 437 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 201 295 - -
Mupr8724g00008 437 ProSiteProfiles Protein kinase domain profile. 182 437 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8724g00008 Mupr-Chr8724 29322 37389 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8724g00008 40 312 Receptor kinase-like Gene Family AT1G53420 40.597 8.93e-68 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mupr8724g00008 PK_Tyr_Ser-Thr 5.3e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8724g00008 - - qsa:O6P43_029227 287.73