Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8718g00003 ATGTTCGATGGAGTACCAGACCAGTTCCACCAATTCATAACTCCAAGGACTTCACTACCTCTTCACTTACCTTTCCCTCTTCATGCTTCAGGAACCCCCAATACCACCTTCCATACCAATTTTGATCCTTATAACCCTTCCCATCATCATCATCATCATCAATTGCCATCACTCCAACCCAACCATCTCTTGCACCCATTACACCACAAAGATGAAGAGAAGGAAGAAAACAGCACCGTCCCAATGAACTTCGAAATCCAAAGAGATCAAAGGCAACAACTACCCGAGCTGGTTGATCCCTGGACTAATGACGAAGTGCTCGCGCTTTTGAGGATCAGATCTAGCATGGAGAGTTGGTTCCCAGAACTCACTTGGGAACATGTCTCAAGGAAGCTAGCAGAGGTTGGATACAAGAGGAGTGCAGAGAAATGCAAAGAGAAGTTTGAAGAAGAGAGTAGATACTTCAGCAACATTAACTACGGGAAGAATAATAACAACAATTATCGGTTTCTGAGCGAGCTTGAACAGCTTTACCAAGCTGGGGGCGGTGATCACCAGGCTGGGACCGAAGAAAAGAGTGAAGAAGAGAAGATGGGCCAGCATGCATCGGAACAAGGGCTTGACGCATCGGGTACAAAACAAAACGACGACGCACCGGAAAAGACAAAAGAGCGTAAGAGGAAGAGGCCAGATAGGTTTGAGATGTTCAAGGGTTTCTGTGAGAGCATCGTCCACAAGATGATGGCTCAGCAAGAGGAGATGCACAACAAGCTCCTCGAGGACATGGTCAAAAGAGACCAAGACAAGTTCACCAGAGAGGAAGCTTGGAAGAAGCAAGAGATGGAGAAGATGAACAAGGAGCTTGAGATGATGGCTCGTGAGCAAGCCATTGCAGGTGATAGACAAGCCAACATTATTCAAATCTTAAACAATTTCTCTTCCACTTCCCCTGCAACTCCCAACAATAATGCTAATTCAAACTCAAACCTAAAACAAAACCCTAATCCTTCTCAAAACACTACTCCCACTACACAAAACCCTACCTCGAAAGACACGTTGCAAGTCATTCCTTCTTCTTCTTCTACTTCGGCTTTGGTTCCCCAGAACCCTAGTTCTTGTTCTCTAGTAGAGATAAATAATGAGAAAGAGGATGTTGGGAGAAGGTGGCCAAAGGACGAAGTGTTGGCGCTGATAAAGCTGAGGTGCACGAGTGTAAACAACAACAATGAAGAGAAGGAAGGGAACAAGGTCCCTCTTTGGGAGAGAATCTCACAAGGGATGTCGGAGTTGGGATACAAGAGAAACGCAAAGAGGTGCAAAGAGAAGTGGGAGAACATAAACAAGTACTTCAGGAAGACTAAGGATGTTAATAAGAAGAGGTCCCTTGACTCAAGGACTTGTCCCTACTTTCACCAATTGAGCACTCTCTATAATGAAGGAAAACTAGTTCTACAATCTGAAAAGTCCCAAAGCCACTTGAATGAGAATCCCGAGCAAGTGCCACCAGATCAAACACAGCCTGATCAGTCTTCTTCTCAGGTGGGGTCTGCTGCTTTCAGTGTGGTTGATCATGGAGGTGAGAAACCCTTGATGCAAGTACCTTCTTTGGATTTTGATCACTTTTAA 1626 0.4502 MFDGVPDQFHQFITPRTSLPLHLPFPLHASGTPNTTFHTNFDPYNPSHHHHHHQLPSLQPNHLLHPLHHKDEEKEENSTVPMNFEIQRDQRQQLPELVDPWTNDEVLALLRIRSSMESWFPELTWEHVSRKLAEVGYKRSAEKCKEKFEEESRYFSNINYGKNNNNNYRFLSELEQLYQAGGGDHQAGTEEKSEEEKMGQHASEQGLDASGTKQNDDAPEKTKERKRKRPDRFEMFKGFCESIVHKMMAQQEEMHNKLLEDMVKRDQDKFTREEAWKKQEMEKMNKELEMMAREQAIAGDRQANIIQILNNFSSTSPATPNNNANSNSNLKQNPNPSQNTTPTTQNPTSKDTLQVIPSSSSTSALVPQNPSSCSLVEINNEKEDVGRRWPKDEVLALIKLRCTSVNNNNEEKEGNKVPLWERISQGMSELGYKRNAKRCKEKWENINKYFRKTKDVNKKRSLDSRTCPYFHQLSTLYNEGKLVLQSEKSQSHLNENPEQVPPDQTQPDQSSSQVGSAAFSVVDHGGEKPLMQVPSLDFDHF 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8718g00003 541 Pfam Myb/SANT-like DNA-binding domain 99 177 IPR044822 -
Mupr8718g00003 541 Pfam Myb/SANT-like DNA-binding domain 387 475 IPR044822 -
Mupr8718g00003 541 PANTHER FI21293P1 52 520 - -
Mupr8718g00003 541 MobiDBLite consensus disorder prediction 214 230 - -
Mupr8718g00003 541 MobiDBLite consensus disorder prediction 488 541 - -
Mupr8718g00003 541 Gene3D - 101 157 - -
Mupr8718g00003 541 Gene3D - 389 452 - -
Mupr8718g00003 541 FunFam Trihelix transcription factor GT-2 101 157 - -
Mupr8718g00003 541 MobiDBLite consensus disorder prediction 314 371 - -
Mupr8718g00003 541 CDD GT1 387 454 - -
Mupr8718g00003 541 ProSiteProfiles Myb-like domain profile. 100 152 IPR001005 -
Mupr8718g00003 541 MobiDBLite consensus disorder prediction 187 202 - -
Mupr8718g00003 541 MobiDBLite consensus disorder prediction 488 518 - -
Mupr8718g00003 541 MobiDBLite consensus disorder prediction 181 230 - -
Mupr8718g00003 541 FunFam Trihelix transcription factor GTL2 389 452 - -
Mupr8718g00003 541 ProSiteProfiles Myb-like domain profile. 388 447 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8718g00003 Mupr-Chr8718 17115 19118 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8718g00003 1 479 Trihelix Transcription Factor Family AT5G28300 38.302 2.28e-97 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Mupr8718g00003 Myb_DNA-bind_4 1.4e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8718g00003 - - gmx:100804367 717.227