Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr870g00002 ATGCCAATTCAGAAAGCAAAGTTGCCAACCCGCCCCCACGCCACCCCCAACGGGACGATAGTGGACCATATTATGTTATTTACACAGGGTTTGAGGGTGAGCCTTGGTGCAACTAAGATTAGTCAAATGGAAGTGCTTCCTTGTTCTGGTGTTCAATATGTTGGGGAATCTGATTGCCCTCCGCAGAGTCCAGGAACAGCTTTTATATACCAGGAAGAACCTAATTGCCCTGAAAATGGTGAACAAGTCAAATTGGCAGCTTGTCAACCGAATGAATCATCACATAATATGCAAGGGCCTCAGATAGAAAGGCAAGGTGATTTGTCAACTAATTCAGATTGCCAATGCATTGGAGCTTCATGTTCTGACTGTCAAGTGGATGACCAAAATGAATATTGTGGTTTTGATGATTTTGAAGAAGACATGATAAATGAACCTGGCTTGATATCTGAGAACTCTATCTCTGTTGTGGATACAATTGAAAGTGAATCACCAAACAACAGTAGGGAAGGAGACTTGTCATGTTCCGAACCCAAGTGGCTAGAGGGGGATGGATCTGTGGCATTGTGGGTCAAGTGGAGAGGGAAGTGGCAGGCTGGTATCCGGTGTGCAAGAGCTGACTGGCCATTATCAACGTTGAAAGCAAAACCAACTCATGACCGAAAGAAATATTTTGTTATATTTTTTCCACACACAAGAATTTACTCTTGGGCGGACATGCTGCTTGTTAGATCAATTAATGAGTTTCCCCATCCTATTGCATATAAGACTCATCAGGTGGGACTGAAAATGGTAAAAGACTTGACTGTTGCACGACGGTTTATAATGCAAAGGCTAGTTGTTGGCATGCTGAACATGGTCGATCAGTTTCATTTTAATGCTTTCACGGAAACTGCACGTGATGTGAAAGTTTGGAAGGAATTTGCCATGGAGGCTTCTCGTTGTAATGGTTATTCTGATTTTGGAAGAATGATTCTCAAGCTGCATAATAGTATACTGCAGCACCATATAAATGCTGACTGGTTACGGCATTCTTATCCCTCTTGGTTTGAAAGGTGTCATAGTACAAATAGTGCTGAATCAGTGGAGCTGCTGAAGGAGGAATTGTTTGATTCTATTTTGTGGAATGGTGTCAATACTCTCTGGGATGCACCAATGCAACCAACATTAGGTTCTGAATGGAAAACCTGGAGGCAAGATGTAGTGAAATGGTTCTCGACACCACTTTCCTTATCAAGCAACAAAGACACCCAGCAACAGAGTTCTGATGATTTGTACATAGCAAACCTTCAGGTTTGTAGAAAAAGGCCCAAACTTGAAGTTCGTCGTGCAGATACACATGCTTCACAAGTGGAAATCAAGGCCCAAACTATTGCTCTTGAGACTGACCCTGGCTTCTTTAAGAATCAGGACACGTTGAGCACATTAGCAGCTGAGTCATGCAAACAGGAAGGTGTTAGGGAGGTGTCTATGGCAACTGATTCACCAAGTAGTTTGGCCAATAAATGGAATGAAATTGTAGTTGAGGCCGCCGTTTCTGATTTCTTACATACCAAAGAAAAGGAATCAACACCTACAAATGAAATGACTGTCGCAAAATCTGTAGAACCTGGTAGTAAGAATCGACAATGTATAGCTTATATTGAAGCAAAGGGGAGACAGTGTGTGAGATGGGCAAATGATGGTGATGTGTACTGTTGTGTACATTTATCCTCCCGATTTTTGGGCAGCTCAGCAAAATCTGAAAAGCCAATTCCAGTTGATACTCCTATGTGCGAAGGTACAACTGTTTTGGGTACTAGATGTAAGCATCGTGCCCTACCTGGTTCTCTATTCTGTAAGAAACATCGGCCTCATGCTGAAACAGAACAGATCTCAAATTTACCTAAAAATACACTAAAGAGGAAATATGAAGAAAATAATACTGGTTCAGAGGATATGTTCTGCAAAGACTTGGTATTGGTAAATGTTGAAAGTCCACTACAAGTGGATCCAGTGTCATCAATTGGTGGTGATTCCTTACATGGAGAAAGCAACTTTAACGAGAAGCCCATGCATTCTGAAAATGATCGTAATGCAATGGTGTCACTGCACTGTATAGGTTCTCCTCCCTATGATAACAAGAATCCTTGTAGGGAAGGTCCTAAACGGTATTGCTTGTACTGTGAAAGACACCTTCCAAGCTGGCTTAAGCGTGCAAGAAACGGGAAGTGTAGAATAGTATCAAAAGAAGTGTTCACAGAACTTTTGGGGGACTGCACCTCATGGGAGAAAAAGGTGCATCTGCATAAAGCATGTGAACTTTTTTACAGGCTATTCAAAAGCATTTTATCGTTAAGAAACCCTGTTCCTAAGGATGTCCAATTCCAGTGGGCTTTGACTGAAGCCTCTAAAGATTCTAGTGTAGGAGAGTTTTTTACAAGGTTAGTTCATAGTGAAAAAGCGAGAATCAAGTCAATATGGGGATTCAATGATGACATGGATATATCCTCTATCATGGAAGAATCACCTCTCTTGCCATCCACAATTAATGATAACTATGATACGGAAAATGCCATCAAGTGTAAGATATGCTCTGCAGAATTTCCTGATGACCAAGCACTTGGTAACCATTGGATGGACAGTCATAAAAAGGAAGCACAGTGGCTGTTTAGAGGCTATGCATGTGCCATTTGTCTGGATTCATTTACTAACAAAAAACTGTTGGAAACCCATGTTCAGGAGAGACACCACGTGCAATTTGTTGAACAGTGCATGCTTCTCCAATGCATCCCTTGTGGGAGTCATTTTGGAAATACTGACCAATTATGGCAGCATGTTTTAGCAGTTCATCCTGTTGATTTTAAACCATCAAAAGCTCCTGAGCAGAAAACTTTCTCTACTGGCGAAGATTCTCCAGTAAAACATGATCAGGGAAATTCAGCCACTTTAGAGAATAATTCTGAGAGTACTGGTTTACGAAAATTTGTTTGCAGGTTTTGTGGGTTGAAATTTAATTTACTACCTGACCTAGGTCGACATCACCAAGCTGCTCACATGGGGCCTAACCTGGCTAGCAATCGCCCTGCAAAGAGGGGAGTTCGCTATTATGCGTATAGATTAAAATCTGGCAGACTTAGCCGCCCTAGATTTAAAAAAAGTTTGGCAGCAGCATCATACAGGCTTAGAAATAAGGCTAATGCTAATTTAAAGCGTTGCATTCAGGCAACAAACTCACTTGGCACGGGTGGAATAACCATACAACCTCCTCATGTTACTGAAACAACAAACATTGGTAGATTGGCAGAACAACAATGCTCAGCTGTTGCAAAGATTTTGTTTTCAGAGATTGAGAAGACAAAACCTCGACCTAACAATCTTGATATTTTATCATTTGCTCGCTCTGCTTGCTGCAAAGTTAGTCTTGCAGCCTCACTGGAGGAGAAATATGGAATTCTGCCTGAAAAGCTCTATTTGAAGGCAGCAAAACTTTGCAGTGAGCATAATATTTTGGTAAATTGGCACCAGGAGGGGTTTGTTTGCTCTAGAGGTTGTAATGTATCAAAGGATCAAGCTTCGCTCTCTCTTTTAGCATCTCTTCCTAATAGTTCTGTAATGCCCAAATTGGTGAATTTATCTGATCCTGCTAGTGATGAGTGGGAGGTGGATGAATTTCACTGCATCATCAATTCCTGCACTTTAAAATTAGGTTCACTGCAAAAAGCTGTTATCTTGTGTGATGACATTAGCTTTGGGAAGGAATCAGTTCCAGTGATTTGTGTGATAGATCAAGAACTTATGCATTCTCTTCATATGAATGGGTGTAATGGACAAAATACAAACTCTTCTATGCCTTGGGAGACCTTTACCTATGTTACGAAGCCAATGCTTGATCAATCCCTTAGTCTTGATTCAGAGAGTCTGCAATTGGGATGTGCTTGCTCTTACTCTACCTGCTGTCCTGAAACTTGTGATCATGTATACCTTTTTGGTAATGACTATGATGATGCAAAAGACATATTTGGGAAACCAATGCGTGGCAGGTTCCCATATGATGAGAATGGTCGAATAATCTTGGAGGAAGGTTATCTTGTCTATGAGTGTAACCACCTGTGCAGATGCAATAAATCCTGTCCAAACAGAGTATTGCAGAATGGAGTAAGAGTCAAATTGGAAGTCTTTAAAACCGAGAAAAAGGGATGGGCAGTAAGAACTGGTGAAGCTATTCTACGTGGCACATTTGTGTGTGAATACATTGGAGAAGTTTTAGATGTGCAGGAGGCACGCAATAGGCGCCAGAGATATGGCACAGAGCATTGCAGTTATTTCTATGACATTGATGCTCGTGTTAATGATATGAGCAGATTGATTGAAGGACAGGCTCAATATGTAATTGATGCTACTAAGTTGGGAAATGTCTCAAGATTCATCAATCATAGCTGCTCCCCAAATCTTGTGAATCACCAAGTCCTTGTGGAGAACATGGATAGTGAACGTGCACATATTGGTCTTTATGCAAGTCGAGATATTGCTTTGGGTGAAGAGTTGACATATGACTATCAGTACGAGCTTGTGCCTGGAGAAGGATCTCCTTGTCTTTGCGAATCCGTCAAGTGTAGGGGACGACTTTATTAG 4614 0.4133 MPIQKAKLPTRPHATPNGTIVDHIMLFTQGLRVSLGATKISQMEVLPCSGVQYVGESDCPPQSPGTAFIYQEEPNCPENGEQVKLAACQPNESSHNMQGPQIERQGDLSTNSDCQCIGASCSDCQVDDQNEYCGFDDFEEDMINEPGLISENSISVVDTIESESPNNSREGDLSCSEPKWLEGDGSVALWVKWRGKWQAGIRCARADWPLSTLKAKPTHDRKKYFVIFFPHTRIYSWADMLLVRSINEFPHPIAYKTHQVGLKMVKDLTVARRFIMQRLVVGMLNMVDQFHFNAFTETARDVKVWKEFAMEASRCNGYSDFGRMILKLHNSILQHHINADWLRHSYPSWFERCHSTNSAESVELLKEELFDSILWNGVNTLWDAPMQPTLGSEWKTWRQDVVKWFSTPLSLSSNKDTQQQSSDDLYIANLQVCRKRPKLEVRRADTHASQVEIKAQTIALETDPGFFKNQDTLSTLAAESCKQEGVREVSMATDSPSSLANKWNEIVVEAAVSDFLHTKEKESTPTNEMTVAKSVEPGSKNRQCIAYIEAKGRQCVRWANDGDVYCCVHLSSRFLGSSAKSEKPIPVDTPMCEGTTVLGTRCKHRALPGSLFCKKHRPHAETEQISNLPKNTLKRKYEENNTGSEDMFCKDLVLVNVESPLQVDPVSSIGGDSLHGESNFNEKPMHSENDRNAMVSLHCIGSPPYDNKNPCREGPKRYCLYCERHLPSWLKRARNGKCRIVSKEVFTELLGDCTSWEKKVHLHKACELFYRLFKSILSLRNPVPKDVQFQWALTEASKDSSVGEFFTRLVHSEKARIKSIWGFNDDMDISSIMEESPLLPSTINDNYDTENAIKCKICSAEFPDDQALGNHWMDSHKKEAQWLFRGYACAICLDSFTNKKLLETHVQERHHVQFVEQCMLLQCIPCGSHFGNTDQLWQHVLAVHPVDFKPSKAPEQKTFSTGEDSPVKHDQGNSATLENNSESTGLRKFVCRFCGLKFNLLPDLGRHHQAAHMGPNLASNRPAKRGVRYYAYRLKSGRLSRPRFKKSLAAASYRLRNKANANLKRCIQATNSLGTGGITIQPPHVTETTNIGRLAEQQCSAVAKILFSEIEKTKPRPNNLDILSFARSACCKVSLAASLEEKYGILPEKLYLKAAKLCSEHNILVNWHQEGFVCSRGCNVSKDQASLSLLASLPNSSVMPKLVNLSDPASDEWEVDEFHCIINSCTLKLGSLQKAVILCDDISFGKESVPVICVIDQELMHSLHMNGCNGQNTNSSMPWETFTYVTKPMLDQSLSLDSESLQLGCACSYSTCCPETCDHVYLFGNDYDDAKDIFGKPMRGRFPYDENGRIILEEGYLVYECNHLCRCNKSCPNRVLQNGVRVKLEVFKTEKKGWAVRTGEAILRGTFVCEYIGEVLDVQEARNRRQRYGTEHCSYFYDIDARVNDMSRLIEGQAQYVIDATKLGNVSRFINHSCSPNLVNHQVLVENMDSERAHIGLYASRDIALGEELTYDYQYELVPGEGSPCLCESVKCRGRLY 1537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr870g00002 1537 ProSitePatterns Zinc finger C2H2 type domain signature. 991 1012 IPR013087 -
Mupr870g00002 1537 SMART set_7 1382 1520 IPR001214 GO:0005515
Mupr870g00002 1537 MobiDBLite consensus disorder prediction 954 980 - -
Mupr870g00002 1537 ProSiteProfiles Post-SET domain profile. 1521 1537 IPR003616 -
Mupr870g00002 1537 ProSitePatterns Zinc finger C2H2 type domain signature. 923 944 IPR013087 -
Mupr870g00002 1537 ProSitePatterns Zinc finger C2H2 type domain signature. 855 876 IPR013087 -
Mupr870g00002 1537 Gene3D Classic Zinc Finger 840 914 - -
Mupr870g00002 1537 SMART preset_2 1239 1366 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Mupr870g00002 1537 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR5 43 1537 - -
Mupr870g00002 1537 MobiDBLite consensus disorder prediction 952 980 - -
Mupr870g00002 1537 ProSiteProfiles Zinc finger C2H2 type domain profile. 887 910 IPR013087 -
Mupr870g00002 1537 Pfam SET domain 1393 1513 IPR001214 GO:0005515
Mupr870g00002 1537 SMART c2h2final6 989 1012 IPR013087 -
Mupr870g00002 1537 SMART c2h2final6 921 944 IPR013087 -
Mupr870g00002 1537 SMART c2h2final6 853 876 IPR013087 -
Mupr870g00002 1537 SMART c2h2final6 887 910 IPR013087 -
Mupr870g00002 1537 Pfam Pre-SET motif 1242 1374 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Mupr870g00002 1537 SUPERFAMILY SET domain 1231 1527 IPR046341 -
Mupr870g00002 1537 ProSiteProfiles Pre-SET domain profile. 1303 1379 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Mupr870g00002 1537 Pfam Zinc finger C2H2-type, 3 repeats 889 1013 IPR040689 -
Mupr870g00002 1537 ProSiteProfiles Zinc finger C2H2 type domain profile. 989 1017 IPR013087 -
Mupr870g00002 1537 ProSiteProfiles SET domain profile. 1382 1514 IPR001214 GO:0005515
Mupr870g00002 1537 Gene3D SET domain 1221 1518 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr870g00002 Mupr-Chr870 15481 27041 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr870g00002 170 1536 C2H2 Transcription Factor Family AT2G23740 52.020 0.0 1405
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mupr870g00002 Pre-SET 2.1e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr870g00002 - - gmx:100786757 2761.1