Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8687g00005 ATGCAAGGGCAGAGAGGTACAATTGGTTCAATGCCTGAAACCTTAGAATTTGATTGTGGAACTACATCAGGTAATTCTACTGTGGAGCAGCAGATTTGCTGGAATAATGTGAATCCTGCAGAAAATCAAATACCTGATTATGTACTTTCTCCTGGCGATATGAACTCATCTTATGTGAATTCTATTAATCATGAATGGCAAAATTTGAGTGGATGGAGCTTAGGCGAGCCAAGTTCCAGCAATACACCAAATGAGATTAACAATAATGAGCAGAAAAGAGAAATTGGATGGTCATCAACCTTTACGGCTGGTGCATTGGCTGGTCCAAGACTAGAAGAAAGACGCATTGAACCAACCAATGCTCTTTCACTAGACAATGTCAATACAGGTCCAATGTACACGCGTAGCCCCAACAATTCTCGTTTGATGTCCCAGAATCTCAACTTAAATGCAGGTTTAGAAGACAGTGGCAGTGATAATAGTCAACATCTGGAGCTCCCTAACTTACACAAGTCTAATGGGTCAGCAGATGAGTTTATACCATCTAATGTTGGGTCTGGTTCTTTTCTGCTTCCTTCCGGAACTAATGGCTTCCTGGTGGAAGATACTGATGTTAGGCCAGGTTCTCTTGATACTCGACGTGTCTCTTGTAAAAGAAAGGCTGTTGAAGGAAATACTGGACAATTTTCAGATGGTGGAAGTTCTAGCTACAGTCAGCATACAGATGGTAGTGCTTGGTTCACCATTCCTACTCAGGATACTGCTGGAAGCAGTTCAAGCAGATCTATTTCCTCAGAACAGGTAAATGCAAGACTTGGCCTGGGTATGGGGGATGAAGCATCTGAAAATGTTCCTGATTCAAACATTGCAGGAAGCTCAGAAAGTTTTCACAGGAATTTCCGTTTGAGGTTAAATCCTTCAAACCAACAAAATTCTGTTCCTCCCACTGCATTCTCAACTGGGAGCATGATTAGGAATTCTGGTGTTCCTTCGTCCTCTCAAGTATCACAAAGGTTTCATTCTGTTGATAATTCTCTGAACTTGAGGTCTGCACCTCCGATAGATAATGTGGTTCCTCAAAGCCAGCCACTTGTAATCCATGTTCCTGCTTTGCCTAGGAACAGGCAATCATTTAGATGGAGTGGTGGTTCTAGCTCAAGAAACATCCATTCATCAAACTCAATTATATGTGCAGACAGGGATCAGGAGGATGCTAACGCAAGAAGAATGTCTAGAAATATTTTAGAACATCCAGTCTTTGTACCTGCAACTGATTTAAGAAATTTGGTTCAAAACCCAACAGTTAGAGCTTCAGGTTCAAGTAGTGAAAATTTAAGCATTCCAGGAAATGTTGCTTCTTCATCACGGACTGGATCAAATCCAGCTACCAATCCCTCATCTGCCTCAACTTGGGTTCCTCGTCCTAATCCTCCGCAGCATCCACGGAGGTTAGCTGAATATGTTCGTCGGTCCTTGTTTTCTCCTGGTTCTGATGCTATTGGAAGTCCAAACAATAATTATTCTTCCTTGCGCTCTGGTCTTTCTAATTCTGAACCAAGGGCGCTATCATCTGGGGGTGGGGCAAACCCGAGAACATCTGCATGGTTGGAGAGGCAAGGAGATAGTGAATTTGGAATTCCTTATTCACTACGTACTTTGGCTGTTGCAGGTGAAGGAAGTAGTAGACTTGTATCTGAGCTCCGCAATGTTTTGGGCCTTATGCGTAGAGGTGGGAACGTGCGACTCGAGCCAAATATATATGAATTTTTATCTGTTCATTGTCTCACTTTTGTGGACTGTTTACTATTTGGCTTACTGGATATTTATGGTAAGCTTGTAAATGCTGGTGTAAGACCTGTGTTTTCATTTTGTCAGGATGTTGTGATCCTTGATCATCAATCGTTTCTTTCTGGAATAGCTGATGTTCATGACCGACACAGGGATATGCGACTTGATGTTGATAACATGTCTTATGAGGAGTTATTGGCTCTGGAAGAGCGCATTGGAAATGTGAGTACTGGATTGAGTGAGGAAACTGTATTGAAACTCTTGAAACAGAGAAAGCACTCGATTGAAAAAGGATCTCAGATTGATGCAGAAGAACCATGTTGTGTTTGTCAGGAGGATTATGGTGATGGAGATGATATTGGAACGCTTGATTGTGGCCATGATTTCCATAGCAACTGTATCAAACAGTGGCTAATGCATAAGAATCTGTGTCCCATTTGTAAGACAACGGGCTTGGCAACGTGA 2253 0.4217 MQGQRGTIGSMPETLEFDCGTTSGNSTVEQQICWNNVNPAENQIPDYVLSPGDMNSSYVNSINHEWQNLSGWSLGEPSSSNTPNEINNNEQKREIGWSSTFTAGALAGPRLEERRIEPTNALSLDNVNTGPMYTRSPNNSRLMSQNLNLNAGLEDSGSDNSQHLELPNLHKSNGSADEFIPSNVGSGSFLLPSGTNGFLVEDTDVRPGSLDTRRVSCKRKAVEGNTGQFSDGGSSSYSQHTDGSAWFTIPTQDTAGSSSSRSISSEQVNARLGLGMGDEASENVPDSNIAGSSESFHRNFRLRLNPSNQQNSVPPTAFSTGSMIRNSGVPSSSQVSQRFHSVDNSLNLRSAPPIDNVVPQSQPLVIHVPALPRNRQSFRWSGGSSSRNIHSSNSIICADRDQEDANARRMSRNILEHPVFVPATDLRNLVQNPTVRASGSSSENLSIPGNVASSSRTGSNPATNPSSASTWVPRPNPPQHPRRLAEYVRRSLFSPGSDAIGSPNNNYSSLRSGLSNSEPRALSSGGGANPRTSAWLERQGDSEFGIPYSLRTLAVAGEGSSRLVSELRNVLGLMRRGGNVRLEPNIYEFLSVHCLTFVDCLLFGLLDIYGKLVNAGVRPVFSFCQDVVILDHQSFLSGIADVHDRHRDMRLDVDNMSYEELLALEERIGNVSTGLSEETVLKLLKQRKHSIEKGSQIDAEEPCCVCQEDYGDGDDIGTLDCGHDFHSNCIKQWLMHKNLCPICKTTGLAT 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8687g00005 750 MobiDBLite consensus disorder prediction 495 533 - -
Mupr8687g00005 750 Pfam Ring finger domain 703 744 IPR001841 -
Mupr8687g00005 750 ProSiteProfiles Zinc finger RING-type profile. 703 744 IPR001841 -
Mupr8687g00005 750 MobiDBLite consensus disorder prediction 435 481 - -
Mupr8687g00005 750 SMART ring_2 703 743 IPR001841 -
Mupr8687g00005 750 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 665 747 IPR013083 -
Mupr8687g00005 750 MobiDBLite consensus disorder prediction 305 334 - -
Mupr8687g00005 750 MobiDBLite consensus disorder prediction 497 530 - -
Mupr8687g00005 750 MobiDBLite consensus disorder prediction 227 265 - -
Mupr8687g00005 750 MobiDBLite consensus disorder prediction 73 93 - -
Mupr8687g00005 750 MobiDBLite consensus disorder prediction 435 470 - -
Mupr8687g00005 750 MobiDBLite consensus disorder prediction 224 265 - -
Mupr8687g00005 750 SUPERFAMILY RING/U-box 697 746 - -
Mupr8687g00005 750 FunFam E3 ubiquitin-protein ligase MBR2 670 748 - -
Mupr8687g00005 750 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 151 748 IPR045191 GO:0061630
Mupr8687g00005 750 MobiDBLite consensus disorder prediction 151 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8687g00005 Mupr-Chr8687 52209 59095 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8687g00005 1 750 C3H Transcription Factor Family AT2G15530 32.161 1.25e-71 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8687g00005 - - gmx:100783014 1236.48