Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8687g00002 ATGGAACACCTCCCTGAGTTTTCTCAACCATACGTTAACGTTGTTGGTGGTGACATTAACACAAACACCGTCGAAGCAAGATTTCATCTTCATCCCCAAGAGGACTTGTATAATATACGCAATAGCAACACTATGCCACTAGCAGATTTAATTGAAACTAACCCTCCTAGTCCTATGCCTTGGTCTTCATTCACGCACTTACCATCCACACTCTCTTTCTCTAATAACAATAATAGCCCTACAACAATAATGCTTCAAGAACAAGAACAAGAACAAAGCGGCGAGAAGCAGCAGAACTCCATGGCGGCGATGAGGGAGATGATATTCAGAATGGCGGCGATGCAGCCGGTGCACATAGACCCCGAGTCGGTGAAGGCGCCAAAGAGGAGGAACGTGAAGATTTCGAAGGAGCCTCAGAGCGTGGCGGCGCGGCACCGCAGAGAGAGGATCAGCGAGAGGATAAGGATACTGCAGAGACTGGTCCCTGGAGGGACTAAGATGGACACTGCGTCCATGTTGGATGAGGCCATTCACTACGTCAAGTTTCTCAAAACGCAGGTTCAGTCACTCCAACGAACTTCTGGGCCACTTCCTGTTAACTCACCAGGGATACCCTTCCCTGTTGCTATGTCTATGTCTATGTCTATGTCGTCTAATACCCCCTTTTTTCCTCTACCTAAACCTTACGGAGATGCATCATAA 702 0.4786 MEHLPEFSQPYVNVVGGDINTNTVEARFHLHPQEDLYNIRNSNTMPLADLIETNPPSPMPWSSFTHLPSTLSFSNNNNSPTTIMLQEQEQEQSGEKQQNSMAAMREMIFRMAAMQPVHIDPESVKAPKRRNVKISKEPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLQRTSGPLPVNSPGIPFPVAMSMSMSMSSNTPFFPLPKPYGDAS 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8687g00002 233 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 134 183 IPR011598 GO:0046983
Mupr8687g00002 233 FunFam BHLH transcription factor 137 197 - -
Mupr8687g00002 233 SMART finulus 140 189 IPR011598 GO:0046983
Mupr8687g00002 233 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 137 194 IPR036638 GO:0046983
Mupr8687g00002 233 Gene3D - 133 197 IPR036638 GO:0046983
Mupr8687g00002 233 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 57 217 IPR045843 GO:0003700|GO:0006355
Mupr8687g00002 233 Pfam Helix-loop-helix DNA-binding domain 142 183 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8687g00002 Mupr-Chr8687 13943 14644 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8687g00002 1 191 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G67060 54.688 2.02e-46 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr8687g00002 HLH 1.1e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8687g00002 - - vum:124831293 263.462