Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8681g00001 ATGGAGCTCCATGACCATGATTTCTTGGAGGAATTAATGGCTCTAAGAAGAGAAACATGGGACACAAATCCATGTTCAGTAGAAAACCAGCTTTTCTCTAATGGCTTGAGTTTTGACTGTTTTGATCAAAACTCTCATGCTTTTCCTCCAAATACTTTCTCTTGCCAAGAAGTTCCGCAGAGTTACAACAATGACTACACCTTCAATGAAATCTACAGTTCCTTACTTAGTGAATTCTCTGCACCCCAAATTATAGATTCATCCTATCACACCCCTCCATTTGTGGCTCAAGAGGATTATCCATTGTCTATGATGGAAGAAGAAGATCCGGGTTTGCTTGGGGAAGAGTTTCATTGTTTGGACCTTCAAGCCACGTGCAAAATGGAGCCAAGCCATTCCCCTGAAATGCCTGTTTTCAACACAGATTCGTGTGTGGAAAGAAGGAATAGAGCTAAGAAGCTTCAGGGGCAACCTTCAAAGAACCTAATGGCAGAGAGGAGGAGAAGAAAGAGATTAAATGACAGGCTCTCCATGCTAAGGTCAATTGTCCCTAAGATAAGTAAGATGGACAGAACAGCTATACTTGGAGACACCATCGATTACATGAAAGAGCTCTTGGAAAAGATTAATAATTTGAAGCAAGAAATAGAAGTGGATTCCAACATGACTAGCATTTTCAAAGATGTAAAGCCAAACGAAATCATAGTGAGAAATTCTCCAAAGTTTGATGTGGAGAGGAGAAATGGCGACACAAGGGTGGAGATCTGCTGTGCAGGGAAGCCAGGCTGCTTGTTGTCTACAGTAAACACTTTGGAAACATATGGCCTTGAGATCCAACAATGCGTTATTAGCTGTTTCAATGATTTCACAATGCAAGCTTCTTGCTCAGAGGAATTGCAGCAGAAGACAATTCTGAGTTCAGAAGATATAAAGCAGGCACTATTTAGAAGCGCAGGATATGGAGGACGATGTTTGTGA 978 0.4131 MELHDHDFLEELMALRRETWDTNPCSVENQLFSNGLSFDCFDQNSHAFPPNTFSCQEVPQSYNNDYTFNEIYSSLLSEFSAPQIIDSSYHTPPFVAQEDYPLSMMEEEDPGLLGEEFHCLDLQATCKMEPSHSPEMPVFNTDSCVERRNRAKKLQGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILGDTIDYMKELLEKINNLKQEIEVDSNMTSIFKDVKPNEIIVRNSPKFDVERRNGDTRVEICCAGKPGCLLSTVNTLETYGLEIQQCVISCFNDFTMQASCSEELQQKTILSSEDIKQALFRSAGYGGRCL 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8681g00001 325 Coils Coil 195 222 - -
Mupr8681g00001 325 SMART finulus 162 211 IPR011598 GO:0046983
Mupr8681g00001 325 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 156 205 IPR011598 GO:0046983
Mupr8681g00001 325 Gene3D - 164 238 IPR036638 GO:0046983
Mupr8681g00001 325 Pfam Helix-loop-helix DNA-binding domain 162 205 IPR011598 GO:0046983
Mupr8681g00001 325 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 160 218 IPR036638 GO:0046983
Mupr8681g00001 325 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 37 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8681g00001 Mupr-Chr8681 6171 7797 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8681g00001 89 325 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 52.209 1.41e-71 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr8681g00001 HLH 1.2e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8681g00001 - - gmx:100814388 590.882