Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8672g00001 ATGGATGGTCCATCCTCACAGTTTGTTTCCTCAAGAAGGATGGGTGTGTATGATCCTATCCACCAAATTAGCATGTGGGAAGAAAATTTCAAAAGTAATGATAATAATTTAACTGTATCCACATCCATAATTGAGGAGGCAGATATAAAGTTAGATAATCACGTTCTGATGCAATCGGAGGATGCTTTTCAGGGAATATTGGGAACATCTATTAAGTATGGCCATGAAGCTAACAAAATTACTGATAAGACACAAAGACGTCTTGCACAAAATCGAGAGGCAGCTCGTAAGAGTCGTTTGAGGAAAAAGGCATACGTGCAACAGTTAGAATCATCTCGTTTGAAACTGATGCAGTTAGAGCAACAGGTAGATCATGCAAAACAACAGGGATTGCATATTGGTGATGGATTGGGTTCTAATAATTTGGGTTTTTCTGGCTCTGTAAATTCAGGGATAACAATTTTTAAGATGGAGTATGGACGCTGGGTGGAGGAGCAAAATAAACAAATCTTAGAACTAAGAACTGCTTTAAGTTCTCACATCAGTGACATACAGCTCGGGACACTTGTAGAAGGCATAATGAACCACTACTCCACACTCTTTAGCATGAAATCTGCTGCTGCAAAAGCAGATGTTTTCTATGTTATGTTTGGTATGTGGAAGACAACGGCTGAACGTTTCTTCCTGTGGATTGGAGGATTTCGCCCCTCTGAGCTTCTAAAGGTTCTGGTCCCTTTGACTGAACCTTTGACAGAACAACAACGGTTTGATGCCTATGGCCTTGAAAAATCATGCCAGCAAGCAGAAGATGCTCTTTCACAAGGTATGGATAAACTTCAGCAAATGCTCGCTGACACTGTAGGGCCAGGACAACTAGTTGAAGGAACATACATTCCACAGATGGATACTGCAATGGAGAGGCTGGAAGCTCTGGTCAGCTTTGTGAACCAGGTAATGTTTGCTTCACTTTTTTCACACCCATTTACTTATCAATTAGTAACTTCTCTTTTCATTGCATGTCATCTCAATCCAATGATGCCTTGCTGTTTGAATTCTTTAAGGCTTGCTTTA 1071 0.4052 MDGPSSQFVSSRRMGVYDPIHQISMWEENFKSNDNNLTVSTSIIEEADIKLDNHVLMQSEDAFQGILGTSIKYGHEANKITDKTQRRLAQNREAARKSRLRKKAYVQQLESSRLKLMQLEQQVDHAKQQGLHIGDGLGSNNLGFSGSVNSGITIFKMEYGRWVEEQNKQILELRTALSSHISDIQLGTLVEGIMNHYSTLFSMKSAAAKADVFYVMFGMWKTTAERFFLWIGGFRPSELLKVLVPLTEPLTEQQRFDAYGLEKSCQQAEDALSQGMDKLQQMLADTVGPGQLVEGTYIPQMDTAMERLEALVSFVNQVMFASLFSHPFTYQLVTSLFIACHLNPMMPCCLNSLRLAL 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8672g00001 357 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 86 101 IPR004827 GO:0003700|GO:0006355
Mupr8672g00001 357 ProSiteProfiles DOG1 domain profile. 152 357 IPR025422 GO:0006351|GO:0043565
Mupr8672g00001 357 CDD bZIP_HBP1b-like 83 134 - -
Mupr8672g00001 357 Coils Coil 102 129 - -
Mupr8672g00001 357 SUPERFAMILY Leucine zipper domain 83 117 IPR046347 GO:0003700|GO:0006355
Mupr8672g00001 357 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 81 123 IPR004827 GO:0003700|GO:0006355
Mupr8672g00001 357 PANTHER TRANSCRIPTION FACTOR TGA9 4 317 - -
Mupr8672g00001 357 SMART brlzneu 79 139 IPR004827 GO:0003700|GO:0006355
Mupr8672g00001 357 FunFam BZIP family transcription factor 82 131 - -
Mupr8672g00001 357 Gene3D - 82 135 - -
Mupr8672g00001 357 Pfam bZIP transcription factor 82 112 IPR004827 GO:0003700|GO:0006355
Mupr8672g00001 357 Pfam Seed dormancy control 170 244 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8672g00001 Mupr-Chr8672 4089 6891 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8672g00001 1 318 Calmodulin-binding Proteins AT5G65210 62.733 5.37e-143 408
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mupr8672g00001 DOG1 2.2e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8672g00001 K14431 - gmx:100780003 543.117