Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8661g00008 ATGCCTCCGAGAATAGTGAAGAGAGGTGCTACGGCGAAGAGGGTATCGAGGGGATCCTCAAAGGCTGCACCTGAGAACCAGCATGAGCCTGAAACTGAGGAAGTGGTTGTGAAAAATCATGAAGAAAAAGACAATTCAGTTGTTGATGTTGGGGTGGAAGAGAAGCCTATTGATGTGGACCAAGGACCTGAGGAAGTGTCAAATGGGTCGGCTAAGGTCGAAAACAATGAAGAGGAGGTTAAGGTGTCTATAGATGAATATGAAAAAGGTGAACAGTTAGATTTGGAGGATAATTATCCTGAGTATGAACAGGAGGAGTATGTTGGTGTTGACTATGATGAGAAGGAAATTGAACAAGATGAAGGTCAGGAGGAGGGAGATGAAGTAGAGGAAGAACCTGAAGAGAATGTAGGTGAAGAAGAGGGTGATACTGGTGATGAAGAAGTTGAATATGTTTATGAAGAAGTTGAGGATGATGATGATGAGCATACTGGTGAGGAGCATGAGCATGATGAACATGCACAGATGCCTGATGTGGAGGAACAGGAACACCGTGAAGTTGTAAAGGAAAGGCAGAAGCGGAAGGAATTTGAAGTGTTTGTCGGGGGCCTAGATAAGGATGCTACTGAGCATGACCTGAAGAAGGTTTTCAGTAAAGTTGGGGTAGTTACTGAAGTCAGGCTGATGATAAATCCCCAGACTAAAAGGAACAAGGGATTTGCATTCCTGCGGTTTGAAACTGTCGAGCAAGCGAAAAGAGCTGTGGTGGAGCTAAAAAATCCAGTGATTAATGGCAAACAATGTGGTGTTACTCCAAGTCAGGACAGTGATACTCTCTACTTAGGTAACATATGCAAGACTTGGAAAAAGGAAGCTTTAAAGGAGAAACTGAAACACTATGGAGTAGAAAATGTGGAGGATTTGACTTTAGTAGAAGATGATACCAATGAGGGAATGAACCGAGGATTTGCATTTTTGGAGTTTTCTTCTCGTTCAGATGCTAAGGAAGCCTATAGGCGATTGCAAAAAAGAGATGTTGTGTTTGGAGTTGATAAGCCTGCAAAGATTTCCTTTGCCGACTCCTTCATTGATCTGGGCGATGAAATTATGGCACAGGTTAAAACTGTGTTTATTGACTCACTACCTCCTTCGTGGGATGAAGATTATGTCCGGGATCTTCTTAAGAAATATGGAGAGATTGAAAAAATTGAGCTTGCTAGGAACATGCCAGCCGCTCGGAGGAAGAATTATGGATTTGTTACATTTAGTACACATGCTGCTGCTGTGGAATGTGCTGATAGCATTACTGGTGCAGGGTTAGGTGAAGGTGACAAAAAGGCAAAAGTTAGGGCTAGATTGTCACGGCCTCTTTCGAAACCTCTTCAGAGAGGCCGTGGAAAACATGTTAATCACGGGGACTTCCGTTCTGGCCGCAATTCAGGAAGATTGGTAAGGTCTTCACGGAGTCGACCTGCACCACGTAGTCTTCCTGCTCGTGTGGTGAGAGGAATTGGAAGTCGTGCTCCCCCGGGTAGACCTGTTAGTGTGAGAAGTAGACGTCCTGTCACATCCATGCTAGAAAGAGCCAGGCCAGTGGCTCCTCCAGCTAGAACCTATGACAGGAGATTGGCTGCTCCTGCATATCCAAAAAGTGGCATGAAAAGAGATTATAGTCGACGGGAGGATCTACCACCTCCGAGAAGTAGAGTTTCTGCAGATTATGGCTCTAGGGTAGCCTCTCAGAGGCACACATCTTATAGGGATTATCCTGCCCGTGGCTCTGACTACCCTGAGCTGCATAGAAGTACATCTCGTGGTGCACCAAAGAGAGGTTATGTGGATGATGGTTATGGCCAACGATTTGAGAGGCCTCCTCCTCCCCATCTAAGTTACCGCGAAGGACGGCCCCGTGATTATGACACTCTATCTGGCTCAAAACGTCCTTATACTGCTATAGATGATGTTCCTCCACGGTATGATACTGGTCCTCGCCAATCAAGATCTCGTTTAGATTATGACTATGGAGGTAGTGCTTCACAGTATGGAGATGCTTATGGTGATAGACTTGGAAGATCTAGTCTTGGATATAGTGGCAGCAGAAATTCTATTTCTAATCAAGACTTACATGGGACATGTGGCAGTCGACAAGGCATGAGTTATGGTGGAGGTTCTTTTGGTGGTAGTGATGGTGGTATGTATTCATCAAGTTATGGTGGTGATTACATATCCCGTGGAAGTGATGTAATGTTGGGGGCCGTTCATATTCATCCATGTATTCTGGTAGAGGTGTGGGTGGTAGCAGCAGTTATATGGGTGGAGGTGGATCTGGGAATTATTATTGAG 2343 0.4503 MPPRIVKRGATAKRVSRGSSKAAPENQHEPETEEVVVKNHEEKDNSVVDVGVEEKPIDVDQGPEEVSNGSAKVENNEEEVKVSIDEYEKGEQLDLEDNYPEYEQEEYVGVDYDEKEIEQDEGQEEGDEVEEEPEENVGEEEGDTGDEEVEYVYEEVEDDDDEHTGEEHEHDEHAQMPDVEEQEHREVVKERQKRKEFEVFVGGLDKDATEHDLKKVFSKVGVVTEVRLMINPQTKRNKGFAFLRFETVEQAKRAVVELKNPVINGKQCGVTPSQDSDTLYLGNICKTWKKEALKEKLKHYGVENVEDLTLVEDDTNEGMNRGFAFLEFSSRSDAKEAYRRLQKRDVVFGVDKPAKISFADSFIDLGDEIMAQVKTVFIDSLPPSWDEDYVRDLLKKYGEIEKIELARNMPAARRKNYGFVTFSTHAAAVECADSITGAGLGEGDKKAKVRARLSRPLSKPLQRGRGKHVNHGDFRSGRNSGRLVRSSRSRPAPRSLPARVVRGIGSRAPPGRPVSVRSRRPVTSMLERARPVAPPARTYDRRLAAPAYPKSGMKRDYSRREDLPPPRSRVSADYGSRVASQRHTSYRDYPARGSDYPELHRSTSRGAPKRGYVDDGYGQRFERPPPPHLSYREGRPRDYDTLSGSKRPYTAIDDVPPRYDTGPRQSRSRLDYDYGGSASQYGDAYGDRLGRSSLGYSGSRNSISNQDLHGTCGSRQGMSYGGGSFGGSDGGMYSSSYGGDYISRGSDVMLGAVHIHPCILVEVWVVAAVIWVEVDLGIIIE 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8661g00008 781 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 197 275 IPR000504 GO:0003723
Mupr8661g00008 781 MobiDBLite consensus disorder prediction 97 165 - -
Mupr8661g00008 781 Coils Coil 112 132 - -
Mupr8661g00008 781 MobiDBLite consensus disorder prediction 166 190 - -
Mupr8661g00008 781 FunFam Heterogeneous nuclear ribonucleoprotein Q 278 360 - -
Mupr8661g00008 781 MobiDBLite consensus disorder prediction 626 642 - -
Mupr8661g00008 781 MobiDBLite consensus disorder prediction 459 675 - -
Mupr8661g00008 781 Gene3D - 364 488 IPR012677 -
Mupr8661g00008 781 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 374 456 IPR000504 GO:0003723
Mupr8661g00008 781 MobiDBLite consensus disorder prediction 553 567 - -
Mupr8661g00008 781 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 28 704 - -
Mupr8661g00008 781 FunFam Heterogeneous nuclear ribonucleoprotein Q isoform A 128 277 - -
Mupr8661g00008 781 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 277 361 IPR000504 GO:0003723
Mupr8661g00008 781 MobiDBLite consensus disorder prediction 1 190 - -
Mupr8661g00008 781 SUPERFAMILY RNA-binding domain, RBD 276 437 IPR035979 GO:0003676
Mupr8661g00008 781 MobiDBLite consensus disorder prediction 71 96 - -
Mupr8661g00008 781 CDD RRM_SF 376 450 - -
Mupr8661g00008 781 MobiDBLite consensus disorder prediction 593 608 - -
Mupr8661g00008 781 Gene3D - 278 360 IPR012677 -
Mupr8661g00008 781 Gene3D - 157 277 IPR012677 -
Mupr8661g00008 781 MobiDBLite consensus disorder prediction 24 61 - -
Mupr8661g00008 781 FunFam RNA recognition water-stress protein1 364 489 - -
Mupr8661g00008 781 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 376 438 IPR000504 GO:0003723
Mupr8661g00008 781 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 279 345 IPR000504 GO:0003723
Mupr8661g00008 781 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 199 267 IPR000504 GO:0003723
Mupr8661g00008 781 SUPERFAMILY RNA-binding domain, RBD 192 275 IPR035979 GO:0003676
Mupr8661g00008 781 CDD RRM_SF 199 270 - -
Mupr8661g00008 781 SMART rrm1_1 375 450 IPR000504 GO:0003723
Mupr8661g00008 781 SMART rrm1_1 198 271 IPR000504 GO:0003723
Mupr8661g00008 781 SMART rrm1_1 278 357 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8661g00008 Mupr-Chr8661 46734 51020 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8661g00008 199 437 Eukaryotic Initiation Factors Gene Family AT4G34110 22.053 7.42e-14 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8661g00008 - - gmx:100811387 1169.45