Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8659g00001 ATGGATCTACAAAACATGCAAAATCAAAGCATGCATTTTGTGCTGTCCACTGATTCCAAACCAAGGCTTAAATGGACTCCTGAGCTTCACCAACGGTTCATTGAGGCAACCAATCAGCTTGGAGGTGCAGATAAAGCAACTCCAAAGAGTCTTATGAGGAAATATAGGCTGGGAAAAAGCCAACAACTAGAAACCTGCTCTGACAACAACCAAGAAGATTACATAGAAATCAACAGCAGTGATGGCCATTGCAGCAGGGAAATCAGTCTTGGGGCCCAGAATCAAATTACTGAAAACATGCAGATAGCTCAGGCTCTCCAAATGCAAATGGAAGTGCAAAGGAAACTTTATGAACAAATTGAGGTGCAGAAACATTTGCAGCTGAGAATTGAAGCTCAAGGGAAGTATTTACAATCAGTGCTAAAGAAGGCACAGGAAGCACTTGCTGGATACAATTCTTCCCCAGTGGGGATAGAACTCACAAAAGCTGAACTTTCTCAGCTAGTTACCATCATTAACAATGCTTGTCCAAGTTCTCCCATCTCAGAACTGACAGAAACAAGAGGGGTGAGTTTAAACTGTGGGGATAGGAAAAGAGACAGAGGCACTATGTGTTCACTGGAAAGTTCTTTGACATCTTCTGAAAGCTCGGGGAGAAAGGAAGAGAAAAGGCCAATGGAAGAAGTAGGGGACTTGAAAAGCTCCAACAATGTTTCACATGAATTGCCACTAATGGACATTATTCACACTGAGGATAAAGCATCCAATGGAGGCTCAAGCAACGAGACTAGTGGGAGAAAGAGAAGTGCAGCAACAAAATCTGATGATGGTAGCTCTGTTGAGCAACCATGTGGGAAAAGATGTGGCAACAAGTTGAGGAAACCCAAGTTGTCAGAAATGCTTGACTTGAACAGCCAGTGTCAGAGTGACATGGACTCAAAAACATTAGACTTAAATTGCAGCAATAGGCAATGGCACATGACTTCAGATATAAATACGTCAGTGGCACAAAGTTTCACTTCACAGGAGGGAGTTGGCAATGTTAGAGGAAGAGTTCTTGGGGGATCATCAGCTATAAATGGGGGAGCAAGTGAGGAATTTGTTTGCAAAGCTGGTTGGGACAAGAAGCTAGTCAAAGAAGCTTATGAATGGGTGGAATCAAAGGTGGTCTTTCCTCCTTATTTTCTCTCCGCATGGCAATTTGTTGCTGAATTCAGCCTTCTTGAAGCAGGAATCTTACCGTACAATGGCTTCAGCTTGGAACATATCAAGGGAACCAAGATTTCTGGGAGTGTCTTTGATGAATTTGGAAAGAGACACACCTCAGCTGACCTTATGAATGCAGGGAATCCAAACAACCTTCTGAACAACACAGACCCCATGCTAATCCCTTATGTGAGGTTCAACTATCTAGCAAGTGAAAATGACATGGAAGAATGTGTCAAGATGACAAAACTA 1458 0.4273 MDLQNMQNQSMHFVLSTDSKPRLKWTPELHQRFIEATNQLGGADKATPKSLMRKYRLGKSQQLETCSDNNQEDYIEINSSDGHCSREISLGAQNQITENMQIAQALQMQMEVQRKLYEQIEVQKHLQLRIEAQGKYLQSVLKKAQEALAGYNSSPVGIELTKAELSQLVTIINNACPSSPISELTETRGVSLNCGDRKRDRGTMCSLESSLTSSESSGRKEEKRPMEEVGDLKSSNNVSHELPLMDIIHTEDKASNGGSSNETSGRKRSAATKSDDGSSVEQPCGKRCGNKLRKPKLSEMLDLNSQCQSDMDSKTLDLNCSNRQWHMTSDINTSVAQSFTSQEGVGNVRGRVLGGSSAINGGASEEFVCKAGWDKKLVKEAYEWVESKVVFPPYFLSAWQFVAEFSLLEAGILPYNGFSLEHIKGTKISGSVFDEFGKRHTSADLMNAGNPNNLLNNTDPMLIPYVRFNYLASENDMEECVKMTKL 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8659g00001 486 MobiDBLite consensus disorder prediction 250 291 - -
Mupr8659g00001 486 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 5 53 IPR044848 GO:0003700
Mupr8659g00001 486 MobiDBLite consensus disorder prediction 215 230 - -
Mupr8659g00001 486 Gene3D - 19 132 - -
Mupr8659g00001 486 MobiDBLite consensus disorder prediction 253 267 - -
Mupr8659g00001 486 Coils Coil 103 123 - -
Mupr8659g00001 486 Gene3D - 391 436 - -
Mupr8659g00001 486 MobiDBLite consensus disorder prediction 192 238 - -
Mupr8659g00001 486 Pfam MYB-CC type transfactor, LHEQLE motif 100 146 IPR025756 -
Mupr8659g00001 486 NCBIfam myb-like DNA-binding domain, SHAQKYF class 20 55 IPR006447 GO:0003677
Mupr8659g00001 486 SUPERFAMILY Homeodomain-like 19 54 IPR009057 -
Mupr8659g00001 486 Gene3D - 321 454 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8659g00001 Mupr-Chr8659 15839 27736 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8659g00001 11 287 G2-like Transcription Factor Family AT1G69580 45.484 1.62e-56 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mupr8659g00001 Myb_CC_LHEQLE 1e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8659g00001 - - gmx:100787178 536.184