Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8654g00002 ATGCATCACTCCCTCTCTTCTCTCTTCCTCAGTTCAAACCAAACAACAACAACCTTTTTCACACCTCAATTCTTGAGCATGTCTTTCAGTTTCACTGACCTCCTTTCTACCAACAATAACATGACCATGGATGATGATGCTTTTGGTTTTGAATTTGCTAACTTCAAGTCAGCTCCACCACCTCTTTCACTACCTCTCTCTTCTTCATCCATTTTCCCTTCTTATTCTGAGTTCCCACCTGGTTTTGGCGCAACTCAATCATTGTATTCACCCCTCTTTTTTTCTTCTCAAAATGTTCCTGCATCTTACACAAGTGAGCCCTCTTCTAGCATGAGCTTCAACATGAGAAATAGTTCAACTGAGGGCCAACAAGGTAACAAGGAGGAAGAGAGAAACTACTCCAACCTCTCTTTCCAAACAACAACGAACCACGCGCCTTTCTTTCAATCTTCTACAAGCATGTTTCAAGTGCAGGAGCCACTAAAGGAACAGGACACAATGATATTCAATGAAGCTGCAGAGAAAACAAATTTCTCATCTGAGAGGACAGAAACAAAATCTGAATATCCATCCACTCGGGGCTTCTTCACAGAAATGGCCTCAACCAAACCTGAGATACAAAGCAATTCTGCTCCTGGATCTGTTCATTTTAACTCCACCAATGCTTATAAGTCTATTAGAGATCAAAAAAGATCAGAAGATGGGTACAATTGGAGAAAGTATGGGGAGAAACAAGTGAAAGGTAGTGAAAATCCGCGCAGTTATTACAAGTGCACGCACCCCGGTTGCCAAACAAAGAAGAAAGTTGAGAGGAATTTAGAGGGACATGTTACTGAAATAGTATACAAAGGAACTCACAATCATCCCAAGCTACTGTCTAATAGAAAAACTGGCTCTCAATCAATTCATCAAACTTCTTCATCCTGCACCAACTCAGGGATTTCTGATCCATCTGTGGGAGAGGAAGATTTTGAGCAAACATCTCAAACTAGTTATTCTGGAGGGGGTGATGATGACCTTGGACCTGAGGCCAAAAGATGGAAGGGGGAGAATGAAAATGATGGCCTTTCCTATTCCTCTGCTGGGACTAGAACTGTTAAGGAACCTAGAGTTGTGGTTCAAACTACAAGCGAAATTGACATACTTGATGATGGATATAGGTGGAGGAAATATGGACAGAAAGTAGTTAAAGGAAACCCAAACCCAAGGAGCTACTACAAATGCGTAACCACAGGTTGTCCGGTGAGAAAACATGTTGAGAGAGCTGCACATGATATGAAAGCTGTGATTACAACTTATGAAGGGAAACATAATCATGATGTACCTATAGGACGAGGAAATGCAAGGTATAACATGAACAGAACTTCTCTAAACAACAACAATAACAACAACACCAGCAATGAAACAGCAGCCCCTGCTCCTATAAGGCCCTCAGCAGTCACTAATTATTCTAACTCAGCAAGTTTCACCAATTCACTTCATGACACAAAGCTTCCAATAACTGCAAGTCAAGAACCTTTTCCAACGGACTTGTTGCTGAGCCCTGGAAGCCTTGGATTTTCCGCTAATGACTCATTCCTTCAGTCTATTTTGTCAAAGAACTTCTAA 1608 0.4142 MHHSLSSLFLSSNQTTTTFFTPQFLSMSFSFTDLLSTNNNMTMDDDAFGFEFANFKSAPPPLSLPLSSSSIFPSYSEFPPGFGATQSLYSPLFFSSQNVPASYTSEPSSSMSFNMRNSSTEGQQGNKEEERNYSNLSFQTTTNHAPFFQSSTSMFQVQEPLKEQDTMIFNEAAEKTNFSSERTETKSEYPSTRGFFTEMASTKPEIQSNSAPGSVHFNSTNAYKSIRDQKRSEDGYNWRKYGEKQVKGSENPRSYYKCTHPGCQTKKKVERNLEGHVTEIVYKGTHNHPKLLSNRKTGSQSIHQTSSSCTNSGISDPSVGEEDFEQTSQTSYSGGGDDDLGPEAKRWKGENENDGLSYSSAGTRTVKEPRVVVQTTSEIDILDDGYRWRKYGQKVVKGNPNPRSYYKCVTTGCPVRKHVERAAHDMKAVITTYEGKHNHDVPIGRGNARYNMNRTSLNNNNNNNTSNETAAPAPIRPSAVTNYSNSASFTNSLHDTKLPITASQEPFPTDLLLSPGSLGFSANDSFLQSILSKNF 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8654g00002 535 SMART WRKY_cls 382 441 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mupr8654g00002 535 SMART WRKY_cls 232 290 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mupr8654g00002 535 FunFam WRKY transcription factor 220 292 - -
Mupr8654g00002 535 MobiDBLite consensus disorder prediction 105 131 - -
Mupr8654g00002 535 Gene3D WRKY domain 218 290 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mupr8654g00002 535 MobiDBLite consensus disorder prediction 291 335 - -
Mupr8654g00002 535 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 145 467 IPR044810 GO:0003700
Mupr8654g00002 535 MobiDBLite consensus disorder prediction 286 362 - -
Mupr8654g00002 535 SUPERFAMILY WRKY DNA-binding domain 374 442 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mupr8654g00002 535 SUPERFAMILY WRKY DNA-binding domain 228 289 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mupr8654g00002 535 Pfam WRKY DNA -binding domain 233 289 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mupr8654g00002 535 Pfam WRKY DNA -binding domain 383 439 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mupr8654g00002 535 Gene3D WRKY domain 369 435 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mupr8654g00002 535 FunFam WRKY transcription factor 33 369 435 - -
Mupr8654g00002 535 ProSiteProfiles WRKY domain profile. 377 442 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mupr8654g00002 535 MobiDBLite consensus disorder prediction 204 225 - -
Mupr8654g00002 535 ProSiteProfiles WRKY domain profile. 227 291 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mupr8654g00002 535 MobiDBLite consensus disorder prediction 204 231 - -
Mupr8654g00002 535 MobiDBLite consensus disorder prediction 105 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8654g00002 Mupr-Chr8654 6114 9301 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8654g00002 227 512 WRKY Transcription Factor Family AT2G38470 53.605 4.12e-102 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mupr8654g00002 WRKY 2e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8654g00002 K13424 - gmx:100127367 814.298