Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8651g00002 ATGGCGACGAGAAATCGCACTTTGCTTTTCAGAAAGCACAGAGATGCGTTGAAGAGTGTTCGGGCTCCCTCCATCTCTTCGCCGCAGTCCACCGCTCCCGCCACCGGCGCTAGCCCCGTCATCGAATTGGTCAGCACCTCGCTTCTCAATCCTAATCGCTCTTACGCTCCGCTCAGTACCGAGGATCCCGGCAATTCAAGTAGGAGTGCAAATGCAGTTACTGTGGGGCTACCTCCGGCATGGGTGGATTTATCAGAAGAAATATCAGCAAATGTGCAACGTGCACGCACAAAAATGGCAGAGTTGGCCAAGGCTCACGCAAAGGCTTTGATGCCGTCATTTGGAGATGGTAAGGAAGACCAACATGCTATTGAGACTCTAACACATGAGATAACTGAGTTAATAAAGAGGTCGGAAAAGAGACTGCGGAGACTTTCTGCTACTGGGCCTTCTGAGGATTCCAATGTCAGGAAAAATGTGCAGCGTTCTCTTGCTACTGACCTTCAGAACCTCTCGGTAGAGCTCCGCAAGAAACAATCAACTTATTTAAAGCGCCTCAGGCTGCAAAAAGAGGGTCAAGATGGAGTTGATCTAGAGATCAACTTAAATGGAAGTAAATCCAGATATGAAGATGATGACTTGGATAATATGGTATTTAATGAGCATCAGATGGCCAAGGTGAAAAAAAGTGAAGCATTCACAGTAGAAAGAGAAAAAGAGATCCAACATGTTGTGGAATCTGTGAACGAGCTTGCTCAGATTATGAAGGATTTATCAGTACTAGTCATAGACCAGGGAACCATTGTCGATAGAATAGACTACAACATTCAGAAGGTTGCAACGACAGTAGACGATGGCCTTAAACAGCTGCAGAAGGCAGAGAGAACTCAGAAAAAGGGGGGCATGGTAATGTGTGCTACTGTGCTTCTCATCATGTGCTTCGTCATAGACCATATTAATTCTCTTGAACTTTTTTTTTTTTTTGCAACTGGGTGGGTAGGGTGCAGTAGGTGTGTTAGAGGCACAAGAACTTTAGAGGTTGGTGTG 1047 0.4575 MATRNRTLLFRKHRDALKSVRAPSISSPQSTAPATGASPVIELVSTSLLNPNRSYAPLSTEDPGNSSRSANAVTVGLPPAWVDLSEEISANVQRARTKMAELAKAHAKALMPSFGDGKEDQHAIETLTHEITELIKRSEKRLRRLSATGPSEDSNVRKNVQRSLATDLQNLSVELRKKQSTYLKRLRLQKEGQDGVDLEINLNGSKSRYEDDDLDNMVFNEHQMAKVKKSEAFTVEREKEIQHVVESVNELAQIMKDLSVLVIDQGTIVDRIDYNIQKVATTVDDGLKQLQKAERTQKKGGMVMCATVLLIMCFVIDHINSLELFFFFATGWVGCSRCVRGTRTLEVGV 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8651g00002 349 Coils Coil 85 105 - -
Mupr8651g00002 349 SUPERFAMILY t-snare proteins 77 286 IPR010989 GO:0016020|GO:0016192
Mupr8651g00002 349 PANTHER SYNTAXIN 84 312 IPR045242 -
Mupr8651g00002 349 SMART SynN_4 72 187 IPR006011 GO:0016020
Mupr8651g00002 349 CDD SNARE_syntaxin16 236 292 - -
Mupr8651g00002 349 Pfam SNARE domain 267 316 IPR000727 -
Mupr8651g00002 349 ProSitePatterns Syntaxin / epimorphin family signature. 237 276 IPR006012 GO:0005484|GO:0006886|GO:0016020
Mupr8651g00002 349 FunFam Syntaxin-43 78 285 - -
Mupr8651g00002 349 SMART tSNARE_6 226 293 IPR000727 -
Mupr8651g00002 349 Gene3D - 78 285 - -
Mupr8651g00002 349 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 231 293 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8651g00002 Mupr-Chr8651 6066 10624 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8651g00002 1 316 SNARE and Associated Proteins AT3G05710 76.852 0.0 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8651g00002 K08489 - gmx:100796741 556.984