Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8649g00002 ATGGGGAAGAAAAAGAAACAAGTAGGAGAAATAAGGGAGGATAGTAAAGTGGGAGAAAGCAGCTCCAGAGCCTATGACAATGATACTATGGTGTTTATATCCATGTCTCAAGAATTGAAGAATGAGGGGAACAGGCTGTTCCAAAAGAGGGATCTTGAAGGGGCTTTATTAAAATATGAGAAAGCCCTCAAGTTGCTTCCGAGAAATCATATTGATGTGTCCTATCTGCGAAGCAACATGGCTGCATGTTACATGCAGATGGGACTCAGTGAGTTCCCAAGGGCTATTCATGAATGTGATTTGGCCCTTGAAGTGACACCGAAATATGGTAAAGCTCTGTTGAAGAGGGCAAGGTGCTATGAGGCTTTAAATAGGCTGGATTTAGCTCTGAGAGATGTCAGCACTGTTGTGAAGATGGAGCCAAATAATGTCATGGCATTGGAGATCTCAGAAAAGGTGAAAAATGCCCTTGAGGAGAAAGGATTGAGAGTAAACGATACAATAATTGAGTTGCCTCCAGATTATGTTGAACCTCCTAATGCTTTGCCTCTAGAAAAGGTATCGAAAGAGAAGGCGCGCAAGAAGAAAGGCAACAAAGAGGAGGAGAAGGCCCCTGATGACAAGATTCTAGAAAAGCAAACTCTGGAGAAATTTGAGGAGAAGAAGGCTGAGGGCGGTATTGTAGTCGTAGAGAAGAAGATCAATGCATCCAAGAAGACGAAGGCTGAGGGTGATATTACAGTGGTAGAGAAGAAGATCAACACGTCCAAGAAGAAGAAGGCTGAGGACAGTATTGTAGTCATAGAGAAGAAGATCAACACGTCCAAGAAGAAGGCCAAGGAAAAAGTTTGTGAGAAGAAGGCTGATATCAAGGAAGTTATAGAGGAAAGAAGTATTGGTAGAATGGAAGATATACCTAAGAAAGCAGCTAAACTTATTTTTGGTGATGATATTAGATGCGCTGAACTTCCTATTAATTGTAGCCTCTTCGAGTTAAGAGAAATTACTCAGTATCGATTCCCTAGACTAGGAGCTGTTCTTGTCAAATACAAGGATGAAGAAGGTGATTTGATCACAATCACTTCTGATGAAGAATTAAGATGGGCTGAAACAGGATCTCATGGTTCTATCCGGCTGTACATTGTAGAAACTACTCCTGAACAGGATCCTCTTTTTGAGAAAATTAAGAATGCATCTAAGAATAGTTGTATGAGAACAAAGGAAATTGTTAGCTCTTCTTGCATTGAGGATTGGATAGTTCTGTTTGCCAAACTGTTCAAGAACCATGTTGGGTTTGAATCTGACATGTATTTAGATTTTCATGAACTTGGGATGAAGCTCTGTTCTGAGGCTTTGGAGGAGATGGTTACAAGCCAAGAAGCACAAGGCCTATTTGACATGGCAGAAGATAAGTTCCAAGAGTTGACTGCTATTTCATTTTTCAACTGGGGAAATGTTCATATGTCTAGGGCAAGGAAGAAAGTATATTTCACAGAAGATTCTTCTAAAGAGCATCTATGTGAACAAATCAAAAGTTCATATCAATGGGCACTGCAAGAATATGCAAAAGCGGGAGAAAAATATCAAGCAGCCATTAAAATTAAGTTAGATTTTCATGAAGGCTTCCTGGCACTAGGGCTGCAGCAGTTTGAGCTAGCAAAACTTTCCTGGTATCATGCACTCAGTAATAATGTAGATTTACTGACATGGCCTTCCACTGACATTCTTCGGATTTACGGCAATGCTGAGGTAAATATGGAGAAGGGAATGCAGATATGGGAAGAATCAGAAAAGCAGAACTTGAGTAAAACATCTAATTCAAATGATGTTAGATTACATTTGCAGAGCATGGGGTTGGAGTTTAAAACTATATCCTTAGATGAACTTGCAGCACAAGAGGCACATATGAGGTCTCAAATTAATCTCCTGTGGGGTACTTTGCTATATGAACGCTCAATTGTAGAATTCAAATTAGGGCTACCAACCTGGCATGAATCTCTAGAAGATGCAATTGAGAAGTTTGAACTTGCTGGAGCTTCTCCAACAGATATAGCTGTAATTTTGAAGAACCACTGTTCAAATAGTACTGCAGTAGATGGTCTTTCCTTCAGAATTGATGAAATAGTACAGGCATGGAATGAGATGTACAAAGCTAAAAAGTGGCACTGTGGAGTTCCATCATTTCGTTTGGAACCCTTATTTAGAAGGCGAAGTGACAGAGCCAACAGTCACTTAGGCTGCTTCTGTGCCTGGAATGCTATTGTTATCAGAAGATATGTTCTAAAATTCTTCAAGACTGTAGATTTTAATTCTGATTGGCTCATGGTATTGATGAAGGTGTTTATTTAA 2349 0.3985 MGKKKKQVGEIREDSKVGESSSRAYDNDTMVFISMSQELKNEGNRLFQKRDLEGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEFPRAIHECDLALEVTPKYGKALLKRARCYEALNRLDLALRDVSTVVKMEPNNVMALEISEKVKNALEEKGLRVNDTIIELPPDYVEPPNALPLEKVSKEKARKKKGNKEEEKAPDDKILEKQTLEKFEEKKAEGGIVVVEKKINASKKTKAEGDITVVEKKINTSKKKKAEDSIVVIEKKINTSKKKAKEKVCEKKADIKEVIEERSIGRMEDIPKKAAKLIFGDDIRCAELPINCSLFELREITQYRFPRLGAVLVKYKDEEGDLITITSDEELRWAETGSHGSIRLYIVETTPEQDPLFEKIKNASKNSCMRTKEIVSSSCIEDWIVLFAKLFKNHVGFESDMYLDFHELGMKLCSEALEEMVTSQEAQGLFDMAEDKFQELTAISFFNWGNVHMSRARKKVYFTEDSSKEHLCEQIKSSYQWALQEYAKAGEKYQAAIKIKLDFHEGFLALGLQQFELAKLSWYHALSNNVDLLTWPSTDILRIYGNAEVNMEKGMQIWEESEKQNLSKTSNSNDVRLHLQSMGLEFKTISLDELAAQEAHMRSQINLLWGTLLYERSIVEFKLGLPTWHESLEDAIEKFELAGASPTDIAVILKNHCSNSTAVDGLSFRIDEIVQAWNEMYKAKKWHCGVPSFRLEPLFRRRSDRANSHLGCFCAWNAIVIRRYVLKFFKTVDFNSDWLMVLMKVFI 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8649g00002 782 SUPERFAMILY CAD & PB1 domains 310 394 - -
Mupr8649g00002 782 ProSiteProfiles TPR repeat profile. 36 69 IPR019734 GO:0005515
Mupr8649g00002 782 MobiDBLite consensus disorder prediction 1 22 - -
Mupr8649g00002 782 ProSiteProfiles PB1 domain profile. 307 384 IPR000270 GO:0005515
Mupr8649g00002 782 Pfam PB1 domain 311 382 IPR000270 GO:0005515
Mupr8649g00002 782 CDD PB1 311 381 - -
Mupr8649g00002 782 SMART tpr_5 36 69 IPR019734 GO:0005515
Mupr8649g00002 782 SMART tpr_5 110 143 IPR019734 GO:0005515
Mupr8649g00002 782 SMART tpr_5 74 109 IPR019734 GO:0005515
Mupr8649g00002 782 SMART PB1_new 307 384 IPR000270 GO:0005515
Mupr8649g00002 782 MobiDBLite consensus disorder prediction 184 207 - -
Mupr8649g00002 782 MobiDBLite consensus disorder prediction 1 21 - -
Mupr8649g00002 782 Gene3D - 309 387 - -
Mupr8649g00002 782 Coils Coil 184 204 - -
Mupr8649g00002 782 PANTHER PROTEIN CLMP1 4 743 IPR044517 -
Mupr8649g00002 782 Gene3D Tetratricopeptide repeat domain 34 166 IPR011990 GO:0005515
Mupr8649g00002 782 MobiDBLite consensus disorder prediction 180 207 - -
Mupr8649g00002 782 ProSiteProfiles TPR repeat profile. 110 143 IPR019734 GO:0005515
Mupr8649g00002 782 SUPERFAMILY TPR-like 37 553 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8649g00002 Mupr-Chr8649 19026 23676 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8649g00002 24 143 Calmodulin-binding Proteins AT3G25230 30.597 8.46e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8649g00002 K26538 - gmx:100807387 1149.42