Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8648g00003 ATGCAGTTGAAACAATACTGTTGTTTCCTCAAAGATGAAGGACAAAGCAAAATTCAGATTGGCAACAAGAAGAACAGTAGGGACTATCCATGGGAAATGTATACCTTGAAGGAGTTGCTTCGAGCAACAAACAACTTTCATCAAGATAATAAGATTGGAGAGGGTGGATTTGGAAGTATTGCAGTGAAGCGGTTGAAAACAATGACTGCAAAGGCAGAGATGGAGTTTGCAGTGGAAGTGGAAGTATTAGGAAGAGTTAGGCACAAGAATTTGTTGGGATTGAGGGGATTCTATGCAGGAGGAGATGAAAGGTTGATTGTGTATGATTACATGCCTAACCATAGCTTGCTCACCCATTTGCATGGTCCACTTGCTAAGGAATGTCAGCTAGATTGGCCTAGAAGAATGAGTATAGCCATTGGAGCAGCTGAAGGTCTAGCGTATCTGCACCATGAGTCAACTCCTCACATCATACACAGAGATATAAAAGCAAGCAATGTTCTTCTAGACACTGAATTTCAAGCTAAGGTTGCTGATTTTGGTTTTGCAAAGCTTGTACCGGATGGTGTTACCCATCTTACCACGAAGGTCAAAGGCACCTTAGGATATTTGGCACCAGAATACGCCATGTGGGGGAAGGTTTCTGAGAGCTGTGATGTCTACAGCTTTGGGATTTTACTTTTGGAGATTATTAGTGCCAAAAAACCAATTGAAAAATTCCCTGGGGGAGTGAAAAGAGATATTGTTCAATGGGTAACACCATATGTCAACAAAGGTCTCTTCAATAACATAGCGGATCCAAAGTTGAAGGGGAAATTTGATTTTGGGCAATTGAAGAATGTGATCACCATAGCTCTTAGATGCACCGATAGTAGTGCTGATAAGAGGCCTAGCATGAAAGAGGTGGTGGAATGGCTCAAGGATGGTGTAGGGAGCACTTAG 942 0.4214 MQLKQYCCFLKDEGQSKIQIGNKKNSRDYPWEMYTLKELLRATNNFHQDNKIGEGGFGSIAVKRLKTMTAKAEMEFAVEVEVLGRVRHKNLLGLRGFYAGGDERLIVYDYMPNHSLLTHLHGPLAKECQLDWPRRMSIAIGAAEGLAYLHHESTPHIIHRDIKASNVLLDTEFQAKVADFGFAKLVPDGVTHLTTKVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEIISAKKPIEKFPGGVKRDIVQWVTPYVNKGLFNNIADPKLKGKFDFGQLKNVITIALRCTDSSADKRPSMKEVVEWLKDGVGST 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8648g00003 313 Pfam Protein tyrosine and serine/threonine kinase 59 305 IPR001245 GO:0004672|GO:0006468
Mupr8648g00003 313 SMART serkin_6 46 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr8648g00003 313 FunFam PTI1-like tyrosine-protein kinase At3g15890 18 110 - -
Mupr8648g00003 313 ProSitePatterns Serine/Threonine protein kinases active-site signature. 157 169 IPR008271 GO:0004672|GO:0006468
Mupr8648g00003 313 ProSiteProfiles Protein kinase domain profile. 46 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr8648g00003 313 FunFam PTI1-like tyrosine-protein kinase At3g15890 111 313 - -
Mupr8648g00003 313 Gene3D Phosphorylase Kinase; domain 1 11 110 - -
Mupr8648g00003 313 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 8 307 - -
Mupr8648g00003 313 PIRSF ILK 10 309 - -
Mupr8648g00003 313 CDD STKc_IRAK 52 307 - -
Mupr8648g00003 313 SUPERFAMILY Protein kinase-like (PK-like) 27 308 IPR011009 -
Mupr8648g00003 313 Gene3D Transferase(Phosphotransferase) domain 1 111 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8648g00003 Mupr-Chr8648 16571 18526 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8648g00003 1 302 Trihelix Transcription Factor Family AT1G68690 41.956 1.18e-79 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Mupr8648g00003 PK_Tyr_Ser-Thr 7.6e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8648g00003 - - gmx:100800710 610.142