Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8639g00005 ATGCAAACCAGCTTTGCCTTTAATGCTATAACCTTTGCAATTGCAATCCGTTCATCCTTCATTTCGTCTCACCCCCCAATCACGACAACGCATGCAGTTGTTGAGAGGAAGGTAGATGACTTGGCTTTGAGCTTGACACAAGGATCAGTCTCTGCGGTGATGTTGGTTAAGAGTGAAACTAAAAAGTTGAACTACCAAACTATGGGTTCTGATAGATCAAGATCTGTGAGATTCCAAGATGAACTTGAGACAAATAAGTTAATGGAAAACAAAGGAAGTCCCATGTCAATGGTGGCCTATGAGATGAGTAGCAAACAGAAGGTTAGGAAGGATGCAAATGCAATAGGCAAGTCCTCTGATGGAAGAGAACTTTCCAGGGTCTTTTCTGAGGATTATGATGCAGCAGAGATTTTGATATTGGATCCTAGGGGACCTAGAGTAAATGCATGGAACAAAATTTTCTTAGCAGCTTGTTTGATTTCATTATTTGTGGATCCCCTATTCTTTTACTTACCAATGGCCAAGAAAGACAAGTGCATTGATATGTCTTCTGGCCTTGAAGTGTTCCTTACCATAATCCGGTCATTCATTGATGCATTTTACATTATTCAGATTTATTTTCGGTTTCAAACTGCTTATATTGCTCCTTCCTCTCGTGTTTCTGGTAGAGGAGAGCTTATTATAGACTCTTCAAAAATTGCATCAAAGTACATGCGAAAAGACTTCTGGCTTGATCTAGTGGCTGCTCAACCACTTCCACAGGTATTGATTTGGGCCGTAATTCCAAATCTAAAAGGGTCTCAAATGATTGCTTCAAGGCATGTTTTGCGCCTTGTTTCCATTTTCCAGTACCTCTTGAGGTTGTATCTCATTTATCCTCTATCATCTGAAATCGTCAAGGCAAATGGGGTAATGATGGAAAAAGCATGGGCTGGGGCAGCATATAATCTCATGCTCTATATGCTGGCTAGTCACGTTTTAGGATCCTCTTGGTACCTGTTATCAATTGAACGCCAGAATGAATGTTGGAAGAAAGCTTGTACAGTGCAGTACCCACACTGTCAGTATCATTATCTTGATTGTCGAAGCATGGGCGACCCAGATAGGATTTCTTGGTTAAGATCAAGCAATCTCTCAGGTCTATGTGATCAGAGCAGTGATTTCTTTCAATTTGGAATTTTTGATGATGCTCTAAGTTTGAAAATTACAGCCTCAAAATTCTTCAACAAATACTGTTACTGTCTCTGGTGGGGACTCAGGAATCTAAGCTCTGTCGGACAGAATCTCATAACAGGCACACGTGTTGCGGAGATCATTTTTGCTGTGGTCGTTGCAATTCTTGGATTGGTGCTTTTTGCATTGCTTATAGGCAACATGCAAACCTACCTGCAATCCACCACTGTACGGCTAGAAGAATGGAGAATAAGGAGGACAGATACGGAAAGATGGATGCATCACAGACAGCTCCCTCATCACCTAAAGCAAAATGTGCGACGTCATGAACAGTTCAGATGGGTTGCTACTAGGGGAGTTGATGAGGAAACCATTCTTGGAGACCTTCCCACAGATCTAAGACGTGACATCAAACGCCACCTTTGCCTTAATCTAGTTCGACAAGTACCACTATTTGATCAGATGGATGAGAGGATGCTAGATGCAATATGTGAAAGGCTGAAACCTTCTCTTTTCACTTCAGGCACATGTGTGGTTCGGGAAGGTGACCTTGTGAACGAGATGCTCTTCATTGTTCGAGGACGCCTAGATTCTTGCACCACCAACGGTGGAAGAACAGGTTTCTTCAACACCTGCAAACTCGGCTCCGGTGACTTCTGCGGTGAAGAGCTCTTGCCATGGGCCTTGGACCCTCGTCCAACGGTTCTCCTTCCTTCATCAACTCGCACGGTGAAAGCCATCACCGAAGTGGAAGCCTTTGCACTCATTGCAGAGGACTTGAAGTTTGTGGCAGCACAGTTCCGCAGGTTGCACAGCAAGCAACTGAGGCACACATTCAGATTCCACTCTCATCAATGGAGGACTTGGGCTGCATGCTTCGTACAAGCGGCATGGTTCAGGTACAAGAGAAGGAAGGAGACAAGTGAGCTCAAGAGGAAGGAGAATCTGATGATGGCCTTTGTGGCTGGAACTGGCACTGAACATTTCTCTGCACCTCTGCAGACCCCAATGTATGCTTCAAAACTAGCATCCAGCCCAAGGAAAGGTATGAGCCTCAGATATGGGCCTGAACTTGACATTATTGGTGCATTGAGGAAGCCCCTTGAACCAGACTTCACTGATGATGATGATGACGACGATGATGATGATGACATTTGA 2331 0.4402 MQTSFAFNAITFAIAIRSSFISSHPPITTTHAVVERKVDDLALSLTQGSVSAVMLVKSETKKLNYQTMGSDRSRSVRFQDELETNKLMENKGSPMSMVAYEMSSKQKVRKDANAIGKSSDGRELSRVFSEDYDAAEILILDPRGPRVNAWNKIFLAACLISLFVDPLFFYLPMAKKDKCIDMSSGLEVFLTIIRSFIDAFYIIQIYFRFQTAYIAPSSRVSGRGELIIDSSKIASKYMRKDFWLDLVAAQPLPQVLIWAVIPNLKGSQMIASRHVLRLVSIFQYLLRLYLIYPLSSEIVKANGVMMEKAWAGAAYNLMLYMLASHVLGSSWYLLSIERQNECWKKACTVQYPHCQYHYLDCRSMGDPDRISWLRSSNLSGLCDQSSDFFQFGIFDDALSLKITASKFFNKYCYCLWWGLRNLSSVGQNLITGTRVAEIIFAVVVAILGLVLFALLIGNMQTYLQSTTVRLEEWRIRRTDTERWMHHRQLPHHLKQNVRRHEQFRWVATRGVDEETILGDLPTDLRRDIKRHLCLNLVRQVPLFDQMDERMLDAICERLKPSLFTSGTCVVREGDLVNEMLFIVRGRLDSCTTNGGRTGFFNTCKLGSGDFCGEELLPWALDPRPTVLLPSSTRTVKAITEVEAFALIAEDLKFVAAQFRRLHSKQLRHTFRFHSHQWRTWAACFVQAAWFRYKRRKETSELKRKENLMMAFVAGTGTEHFSAPLQTPMYASKLASSPRKGMSLRYGPELDIIGALRKPLEPDFTDDDDDDDDDDDI 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8639g00005 776 SUPERFAMILY cAMP-binding domain-like 472 664 IPR018490 -
Mupr8639g00005 776 Gene3D Jelly Rolls 540 660 IPR014710 -
Mupr8639g00005 776 SUPERFAMILY Voltage-gated potassium channels 141 464 - -
Mupr8639g00005 776 Gene3D - 154 466 - -
Mupr8639g00005 776 SMART cnmp_10 542 673 IPR000595 -
Mupr8639g00005 776 FunFam Cyclic nucleotide-gated ion channel 1 469 533 - -
Mupr8639g00005 776 CDD CAP_ED 542 673 IPR000595 -
Mupr8639g00005 776 Pfam Ion transport protein 149 469 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Mupr8639g00005 776 MobiDBLite consensus disorder prediction 756 776 - -
Mupr8639g00005 776 Gene3D Helix hairpin bin 469 533 - -
Mupr8639g00005 776 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 118 739 - -
Mupr8639g00005 776 PRINTS EAG/ELK/ERG potassium channel family signature 455 464 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mupr8639g00005 776 PRINTS EAG/ELK/ERG potassium channel family signature 322 332 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mupr8639g00005 776 PRINTS EAG/ELK/ERG potassium channel family signature 437 448 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mupr8639g00005 776 PRINTS EAG/ELK/ERG potassium channel family signature 205 214 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mupr8639g00005 776 PRINTS EAG/ELK/ERG potassium channel family signature 505 512 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mupr8639g00005 776 PRINTS EAG/ELK/ERG potassium channel family signature 411 428 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mupr8639g00005 776 FunFam Cyclic nucleotide-gated ion channel 1 540 658 - -
Mupr8639g00005 776 ProSiteProfiles cAMP/cGMP binding motif profile. 542 625 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8639g00005 Mupr-Chr8639 64927 71583 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8639g00005 116 766 Ion Channels AT2G28260 64.209 0.0 885
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8639g00005 K05391 - gmx:100804375 1268.45