Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8638g00003 ATGGCCATCCCACCTTTTCACACTTTCACGTTTCACACTCATGAAGAAGATCACGACCACCTCCCTTCAACCTCTCTCAACGCCTTCCCCTCTTTCCCACCCCAACACTTTCAAGGGGGTGCACCCAATTTTATGTTGAAGCGGTCCATGTCGTTTTCAGGCATTGAGAACAAGTGCGATGAAGTGCAGGGAGACGATGAGTTATCTGATGATGGGATCTTCCAGTGTGGGGAGAAGAAGAAGAGGTTGAATTTGGAACAGGTGAAGGCCCTTGAGAAGAGTTTTGAGTTGGGGAACAAGCTTGAGCCAGAAAGGAAAGTGCAGTTAGCTAAGGCTTTGGGATTGCAGCCAAGACAAATTGCCATATGGTTTCAGAATAGAAGGGCCAGATGGAAAACCAAGCAGTTGGAGAAGGAATATCAAGTCCTCAAGAAGCAGTTTGAAGCTGTCAAGGCTGATAATGATGTCCTTAAGGTTCAGAACCAGAAACTACACGCTGAGTTACAAGCTGTAAAAAGTAGGGATTGGTGTGAAGCTGGAATAATGAGCCTTAAGAAAGAAACTGAGGGTTCATGGAGCAATGGAAGTGATAATAGCTCAGACATTAATTTAGATCTCTCAAGAACACCAGTTTTGAACAGTCCTGTATCTTCTCAACTACCCCCTTCTTTAAAGCCCACCAGCATAACCCAAATCCTTCAAAATTCATCAAGGCAAGACCTTCAAGATGAAGGCTTCTGCAACATGTTTCACAACATTGATGCACAACAGAACTTTTGGCCCTGGCCTAATCAGCAGCACCACCATTTCCATTGA 816 0.4473 MAIPPFHTFTFHTHEEDHDHLPSTSLNAFPSFPPQHFQGGAPNFMLKRSMSFSGIENKCDEVQGDDELSDDGIFQCGEKKKRLNLEQVKALEKSFELGNKLEPERKVQLAKALGLQPRQIAIWFQNRRARWKTKQLEKEYQVLKKQFEAVKADNDVLKVQNQKLHAELQAVKSRDWCEAGIMSLKKETEGSWSNGSDNSSDINLDLSRTPVLNSPVSSQLPPSLKPTSITQILQNSSRQDLQDEGFCNMFHNIDAQQNFWPWPNQQHHHFH 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8638g00003 271 SMART HOX_1 77 138 IPR001356 GO:0003677
Mupr8638g00003 271 ProSiteProfiles 'Homeobox' domain profile. 74 134 IPR001356 GO:0003677
Mupr8638g00003 271 SUPERFAMILY Homeodomain-like 75 136 IPR009057 -
Mupr8638g00003 271 PRINTS Lambda-repressor HTH signature 114 130 IPR000047 GO:0003677
Mupr8638g00003 271 PRINTS Lambda-repressor HTH signature 105 114 IPR000047 GO:0003677
Mupr8638g00003 271 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 48 262 IPR045224 GO:0003700
Mupr8638g00003 271 Coils Coil 126 174 - -
Mupr8638g00003 271 Pfam Homeobox associated leucine zipper 134 173 IPR003106 GO:0006355|GO:0043565
Mupr8638g00003 271 ProSitePatterns 'Homeobox' domain signature. 109 132 IPR017970 GO:0000981|GO:0006355
Mupr8638g00003 271 Gene3D - 77 141 - -
Mupr8638g00003 271 CDD homeodomain 79 135 IPR001356 GO:0003677
Mupr8638g00003 271 Pfam Homeodomain 79 132 IPR001356 GO:0003677
Mupr8638g00003 271 FunFam Homeobox-leucine zipper protein ATHB-13 70 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8638g00003 Mupr-Chr8638 24664 26804 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8638g00003 1 264 Homeobox Transcription Factor Family AT5G15150 50.174 3.36e-80 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mupr8638g00003 Homeodomain 1.5e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8638g00003 K09338 - gmx:100797920 422.935