Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8637g00003 GTGGTGGTTGACAGGGAAAATTGGTACGAGGACTCAGCTAAGCAATATCTAAAGGAAAAGAGTGAAAGGAAAAGTAAAGATTATAGTTATTATGACTGGAAGACAAAGTCAACCGTACAGGGAGTGCTGACACCTCGGAATTCGCGCCTAACGACGTTGTCCTCCATCATGAGGTTTCTGCTCAGGTGGTGCCCCTGCTTGGGCAAGCGCGGCGCAGCCTCCGACACCGCCGACGACGATCCCAACCACCCCCGCGACTCCTTCGACCTCATCTTCGATCTCCACGCTCTCCAACTCGCCACCAACTTATTCTCCAACCTCAACCAGCTAGGTCATGGTGGCTTTGGTCCTGTCTTCAAGGGATTGATGCCAAATGGTCAAGAAGTGGCGGTTAAGAAGCTGTCATTGGAATCTAGACAAGGAAATAAAGAATTCACTAATGAAGTCAGGCTATTACTGAAAATCCAGCACAAGAACTTGGTTACATTACTGGGTTGTTGTGCAGAAGGGCCTGAAAAGATGCTTGTTTATGAGTATCTGCCTAACAAAAGCCTTGATCGCTTTCTGTTTGATAAGAGAAAGTCTTCATCTTTGGATTGGGCAACGCGATTTAGAATAGTTACAGGTGTGGCAAGAGGACTTCTCTACCTGCATGAAGAAGCCCCTGAAAGAATTATTCATAGGGACATTAAAGCTAGTAACATATTGCTGGATGAGAAATTAAATCCGAAAATTTCTGACTTTGGTTTGGCAAGGCTGTTTCCTGGGGAGGACACTCATGTGCAGACATTTAGGATTTCCGGTACACATGGTTACATGGCCCCTGAATATGCATTGCGCGGATATCTGTCTGTGAAGACGGATGTTTTCAGTTATGGAGTCCTAGTGTTGGAAATAGTTAGTGGAAGAAAAAATCATGATGTGCAGCTTGGTTCAGAAAAGGCAGATCTCTTGAGCTATGCATGGTCGCTTTATCAAGGAGGGAGGATAATGGAGTTAATTGACCCTACCCTTGGTAAATACAATAGTGATGAAGCAGCAATGTGCATTCAGCTAGGTTTGTTGTGCTGTCAAGCAAGCATAATTGAAAGACCTGACATGAACACTGTTCATCTCATGCTCTCAAGTGATTCCTTCACTTTGCCAAGACCAAGTAAACCAGGAATTCAAGGTCGTATAGGACGTTGGACTACAACCACAACTTCTGCTTTCACTAATAATACCAATGCTAGTAGTGCTACCAGGGCCACTGGTGGTAGTGGTAGTTTTGTAGAGGATTATTCTAGAAATTCTATATCTACCTCTTCTTTTGACGAAGGAAGATGA 1326 0.4434 VVVDRENWYEDSAKQYLKEKSERKSKDYSYYDWKTKSTVQGVLTPRNSRLTTLSSIMRFLLRWCPCLGKRGAASDTADDDPNHPRDSFDLIFDLHALQLATNLFSNLNQLGHGGFGPVFKGLMPNGQEVAVKKLSLESRQGNKEFTNEVRLLLKIQHKNLVTLLGCCAEGPEKMLVYEYLPNKSLDRFLFDKRKSSSLDWATRFRIVTGVARGLLYLHEEAPERIIHRDIKASNILLDEKLNPKISDFGLARLFPGEDTHVQTFRISGTHGYMAPEYALRGYLSVKTDVFSYGVLVLEIVSGRKNHDVQLGSEKADLLSYAWSLYQGGRIMELIDPTLGKYNSDEAAMCIQLGLLCCQASIIERPDMNTVHLMLSSDSFTLPRPSKPGIQGRIGRWTTTTTSAFTNNTNASSATRATGGSGSFVEDYSRNSISTSSFDEGR 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8637g00003 441 SMART serkin_6 104 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr8637g00003 441 FunFam Cysteine-rich receptor-like protein kinase 41 180 380 - -
Mupr8637g00003 441 CDD STKc_IRAK 110 374 - -
Mupr8637g00003 441 Gene3D Phosphorylase Kinase; domain 1 75 179 - -
Mupr8637g00003 441 Gene3D Transferase(Phosphotransferase) domain 1 180 380 - -
Mupr8637g00003 441 ProSiteProfiles Protein kinase domain profile. 104 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr8637g00003 441 FunFam Cysteine-rich receptor-like protein kinase 2 76 179 - -
Mupr8637g00003 441 ProSitePatterns Serine/Threonine protein kinases active-site signature. 225 237 IPR008271 GO:0004672|GO:0006468
Mupr8637g00003 441 Pfam Protein tyrosine and serine/threonine kinase 107 305 IPR001245 GO:0004672|GO:0006468
Mupr8637g00003 441 SUPERFAMILY Protein kinase-like (PK-like) 83 374 IPR011009 -
Mupr8637g00003 441 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 29 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8637g00003 Mupr-Chr8637 16840 19776 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8637g00003 80 391 Receptor kinase-like Gene Family AT4G11490 50.637 1.42e-111 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mupr8637g00003 PK_Tyr_Ser-Thr 1.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8637g00003 - - gmx:100790304 662.529