Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8637g00001 ATGAGACTAGCCATGTCTACCCCTTCAAAGAGCATCATGTGTTCCAGTGAAGATGATAATGAACTTAGAAGAGGGCCATGGAGTGTTGAAGAGGATGATCTTCTCACTAATTACATTGCCAATCATGGAGAAGGGAGATGGAATTTGCTTGCTGTACGTTCAGGATTAAGGAGAACAGGAAAGAGTTGCAGATTGAGATGGCTGAATTATCTAAAGCCAGATGTTAAGAGAGGAAATTTAACCTCAGAAGAGAAGCTTCTGATTTTTCAGCTCCACTCAAAGTGGGGCAACAGGTGGTCAAAAATTGCACAACAGCTGCCAGGCAGAACAGACAATGAAATCAAGAACTATTGGAGAACAAGGATTCAGAAACAAGCAAAATATGTGAAATTTGAGACACATAGAACAGGATTTCTAGAACTTGTCAAGGGTCTACAGATGACAACAAGATGTCTTCAGAAAGCACAAGAAGAATCATCTCCTTCACCCATGTCAATCCAAGACCAAGCAACTCCTTTCCCTTTTGATGGTGCTTCTCATTATTCATCATTTGGGATTGGGACAGCACCAACAACACAAATCACATCCCAGGGAGGTCCCTATTATCTGAATCAGCATGAGCAGAACTCAGACTCTGATCACAACAATGGTTCATGCACTACTAGTCAATTTCAGGCCTTAGATGGCTGTGACTTTGGCATCTGTTCATATGATGGTTATAGTATAAATAACAGTGCCTATGACTTGGATCCCTTCAACCTGACAACCACAATGATTGCTGAGGATCTGGAACTCCCAGTGATTGATTGCCAATTATCAGAAACCAATTTGCTAAACAAGGAATTTACATGTAGCACATGGAGCATGGATGAATTATGGCAATTTGGGAACATACAAAGATGA 903 0.4097 MRLAMSTPSKSIMCSSEDDNELRRGPWSVEEDDLLTNYIANHGEGRWNLLAVRSGLRRTGKSCRLRWLNYLKPDVKRGNLTSEEKLLIFQLHSKWGNRWSKIAQQLPGRTDNEIKNYWRTRIQKQAKYVKFETHRTGFLELVKGLQMTTRCLQKAQEESSPSPMSIQDQATPFPFDGASHYSSFGIGTAPTTQITSQGGPYYLNQHEQNSDSDHNNGSCTTSQFQALDGCDFGICSYDGYSINNSAYDLDPFNLTTTMIAEDLELPVIDCQLSETNLLNKEFTCSTWSMDELWQFGNIQR 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8637g00001 300 Gene3D - 21 77 - -
Mupr8637g00001 300 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 18 204 IPR044676 GO:0003700|GO:0006355|GO:0043565
Mupr8637g00001 300 MobiDBLite consensus disorder prediction 1 15 - -
Mupr8637g00001 300 FunFam Myb transcription factor 24 76 - -
Mupr8637g00001 300 SMART sant 76 124 IPR001005 -
Mupr8637g00001 300 SMART sant 23 73 IPR001005 -
Mupr8637g00001 300 Pfam Myb-like DNA-binding domain 24 71 IPR001005 -
Mupr8637g00001 300 Pfam Myb-like DNA-binding domain 77 120 IPR001005 -
Mupr8637g00001 300 CDD SANT 81 120 IPR001005 -
Mupr8637g00001 300 MobiDBLite consensus disorder prediction 1 24 - -
Mupr8637g00001 300 CDD SANT 26 71 IPR001005 -
Mupr8637g00001 300 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 72 126 IPR017930 -
Mupr8637g00001 300 ProSiteProfiles Myb-like domain profile. 72 122 IPR001005 -
Mupr8637g00001 300 SUPERFAMILY Homeodomain-like 22 118 IPR009057 -
Mupr8637g00001 300 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 19 71 IPR017930 -
Mupr8637g00001 300 ProSiteProfiles Myb-like domain profile. 19 71 IPR001005 -
Mupr8637g00001 300 Gene3D - 79 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8637g00001 Mupr-Chr8637 9049 10466 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8637g00001 19 160 MYB Transcription Factor Family AT1G68320 65.493 1.90e-64 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr8637g00001 Myb_DNA-binding 3.7e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8637g00001 K09422 - gmx:100804227 474.167