Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8631g00002 ATGAGTGTTCCAGAAACAACAACTAGCCCTCCTCCACATCTGTATCCACAAGAACTTCAACTTAAGCTTTACCAAGCCTTCATATTCTCAATTCCCATACTCTTCTCCATCATTCTCTTTCTCTTGTTTTACTTGTTCTACCTCAAGAGGAGGGCTTCCTCTTCTCCACACTTGCTTCCAAGGACCATTGCCAATCCACCAACCACCAATCTCTATCATTCCTCACCTTGTCGTTTGGATCTCACCCTCCAATTCTTGGATAAACTTCCAAGAATTTTATTTGATGAGGATTTCCTAGCAAGGGATTCACTATGTTGTGTATGTCTTGGGGAATTTGAGGTGAAAGAAGAGGTGGTGCAGATTCCTTATTGCAAGCACGTGTTCCACTTGGATTGCATACATCACTGGCTGCAATCAAACTCCACTTGTCCACTTTGTAGATGTTCCATCATCCCCACTACCAAGTTCCTCAATCCACCACCACCACCACCTATCAATATTATATCATCAGACCCACCCCAACATGGTGCTATCATTTCCAACTCTCCATTACAAATGCCACCTCACCCACAACATCACCACCTTGCTGCTTCCTCTACCCAATGA 606 0.4389 MSVPETTTSPPPHLYPQELQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSSPHLLPRTIANPPTTNLYHSSPCRLDLTLQFLDKLPRILFDEDFLARDSLCCVCLGEFEVKEEVVQIPYCKHVFHLDCIHHWLQSNSTCPLCRCSIIPTTKFLNPPPPPPINIISSDPPQHGAIISNSPLQMPPHPQHHHLAASSTQ 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8631g00002 201 FunFam Putative E3 ubiquitin-protein ligase RHA4A isoform A 74 152 - -
Mupr8631g00002 201 SUPERFAMILY RING/U-box 83 157 - -
Mupr8631g00002 201 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 17 159 - -
Mupr8631g00002 201 SMART ring_2 105 146 IPR001841 -
Mupr8631g00002 201 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 73 152 IPR013083 -
Mupr8631g00002 201 Pfam Ring finger domain 105 147 IPR001841 -
Mupr8631g00002 201 CDD RING-H2_EL5-like 105 147 - -
Mupr8631g00002 201 ProSiteProfiles Zinc finger RING-type profile. 105 147 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8631g00002 Mupr-Chr8631 19150 21340 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8631g00002 1 152 C3H Transcription Factor Family AT4G10150 39.375 1.57e-36 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8631g00002 K19039 - gmx:100794298 310.071