Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8613g00001 ATGTTGGAGAGAGATCTAAACAGTGGCCAAGAACCCATAACAGGGATCAGCCGCATTCAAAAGGCACCAACAACTGACTCGAAAAGAAAATGGGATAAATTTTCACACGTGTTTCTATTGACCCGGATGATGGAAATTGTGTCCACCAACTACTTCCCTGAACTTGAATTGGAGGATCCAACCTTCTTTGATCAATACCCCATGGATTCATTTGCATGTCCACTTGATGACTTTGACTTCGAGTCTTTCTCCGGATCCCCAGAGAGCAATTCCTCTCATCAGTTCAACTCCGAAAGCACACAAAATAGTTTCCCAGCAAGACCAACCAAGAGGTTCAGGACATTCAATACCTTGAACACTTTTGCCAGTGACTTAACACCACACAAGGTTTCTGCTTCTCCATCCTCCCAACTTATTTCTTTTGGAAACTTTAATGCCCCATCACACGCTTACCAGCAATTTCACAACCTGGACTCCGATGTGAAGCCTAAAATCGAGAACGCGTGCAGTGAGAACATGGATTTTGCAGCTTTTGTTTCTCAAGGTTCATATGAGGAAAAAAGCTTCCCATGTTCTGATAATATAACAAACCAGGTTGGCATAACAACTAGGAATCCAATCCAAGCTCAAGAGCACGTAATAGCTGAAAGAAAAAGAAGGGAAAAGCTCAGCCAGAGATTCATTGCTCTTTCCGCCATCCTTCCTGGCCTCAAGAAGTTATGTATATGGTTGCGTGCACAGATGGACAAGGCTTCGGTGTTGGGAGATGCTATAAAGTATGTGAAACAACTACAAGAGCGCGTGGAAACTCTGGAGGAGCAAGCAGCGAAGAGAAGAGTTGGATCTTCGGTCCTGGTGAAAAGATCTATTCTCTTCGCCGACGATGAAAACTCTGACAGCGACTTTGACCATTCACTCCCCCAAATCGAAGTCAGAGTTTCTGGGAAAGACGTGCTCATCAGAACTCAAAGCGACAAGCACAGTGGACATGCTGCAATGATACTCAGCGAATTAGAAAACCTTCATTTCATTGTCCAGAGTAGCAGCTTTTTGCCCTTCGGCAATAACAATATTGATGTAACTATTATTGCTCAGATGAACAAGGAAAACAGCATGACAGCAAAGGATCTCCTAGGAAGGCTACGACAGGCTTTAAGGCAGTTGGCATAA 1170 0.4393 MLERDLNSGQEPITGISRIQKAPTTDSKRKWDKFSHVFLLTRMMEIVSTNYFPELELEDPTFFDQYPMDSFACPLDDFDFESFSGSPESNSSHQFNSESTQNSFPARPTKRFRTFNTLNTFASDLTPHKVSASPSSQLISFGNFNAPSHAYQQFHNLDSDVKPKIENACSENMDFAAFVSQGSYEEKSFPCSDNITNQVGITTRNPIQAQEHVIAERKRREKLSQRFIALSAILPGLKKLCIWLRAQMDKASVLGDAIKYVKQLQERVETLEEQAAKRRVGSSVLVKRSILFADDENSDSDFDHSLPQIEVRVSGKDVLIRTQSDKHSGHAAMILSELENLHFIVQSSSFLPFGNNNIDVTIIAQMNKENSMTAKDLLGRLRQALRQLA 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8613g00001 389 MobiDBLite consensus disorder prediction 84 108 - -
Mupr8613g00001 389 Pfam Helix-loop-helix DNA-binding domain 210 265 IPR011598 GO:0046983
Mupr8613g00001 389 Gene3D - 202 279 IPR036638 GO:0046983
Mupr8613g00001 389 CDD bHLH_AtNAI1_like 209 289 - -
Mupr8613g00001 389 PANTHER BHLH TRANSCRIPTION FACTOR 66 387 - -
Mupr8613g00001 389 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 209 279 IPR036638 GO:0046983
Mupr8613g00001 389 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 207 264 IPR011598 GO:0046983
Mupr8613g00001 389 SMART finulus 213 270 IPR011598 GO:0046983
Mupr8613g00001 389 Coils Coil 254 281 - -
Mupr8613g00001 389 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8613g00001 Mupr-Chr8613 9353 11358 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8613g00001 44 385 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 38.244 7.99e-61 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr8613g00001 HLH 1.8e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8613g00001 - - gmx:100791810 500.36