Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8600g00006 ATGGCCCCTAGAATCCTACTATGCGGCGACGTTTTAGGCCGCCTCAACCAGCTCTTCAAGCGCGTCTCATCGGTGAACAAATCCGCAGGTCCATTCGACGCGCTCTTGTGCGTGGGCCAGTTCTTCCCGGACTCGCCGGAGCAGGTGGAGGAGCTTACGGCGTACATCGAAGGCGGGTCCCACATTCCCCTCCCTACTTACTTCATCGGCGACTACGGCGTCGCCGCCCCTAAAATTCTCTTGCAAGCTTCCAAGGACTCCGCCAACCGCGGTTTCAAGATGGACGGCTTCAAGATTTGCGACAACTTGTATTGGTTGAGAGGCAGCGGCAAATTCCCCCTCTTCGGGTTATCCGTAGCCTATTTATCTGGTAGGAAGTCATCCAGTGTTCAGCAGTTCGGAACTTACACTGAAGACGATGTTGATGCTTTGCGAGCAATTGCTGAGGAACCTGGAGTTGTTGATTTTGGGATCACCAATAGAGCAGCTGCTTCAGACATTCCTGCCGGACTCTCTGATGCTGTAGGCAGTGATTCAACCATATCGGAGTTAGTACAAGAGATCAAGCCACGTTATCACATTGCAGGCACTAAAGGTATATACTATGCCCGTGAACCATATTCCAATGTTGATGCTGTGCATGTCACTCGTTTCATAGGGCTTGCGTCTGTTGGAAATAGAGATAAGCAGAAATTTATTCATGCAATCTCCCCCACACCTGCATCCACCATGTCTTCGACTGAGATTGCCATGAAAACCACAAATACCACCTTATCACCGTACACATTTGTGGAGAAAAGAACTTCTCCAATGGATTCCACAAAGAGATCCAGTGATTCTAACTCTGATTCTCAATATTGGAGATATGATGTTCCTCAAAAGCGACAAAAACACGAAGCTGGACATGGTGATAAGTTGTGTTTCAAATTTGTTTCTTCTGGCTCTTGTCCACGAGGAGAGAAGTGCAATTTTCGACACGATATAGATGCAAGGGAGCAGTGTATGAGAGGTGTATGTTTTGATTTTTTGAACAAGGGAAAATGTGAAAGGGGTTCAGATTGCAACTTTAAGCACAGCTTGCAGGATGAAGGTGACAAACATCCTTCTAGGAGGTCTGGCAGATCAAAAGAATGTTGGTTTTGCTTGTCAAGTCCGAATGTGGAGTCACATTTAATAATAAGCATTGGGGGAAATTACTACTTGGCACTGGCTAAAGGTCCACTTGTTGAAGACCACGTACTGATAATACCGGTTGAGCATATGCCTAGTACCTTATCTCTGCCTTCTGAATCTGAAATTGAACTCTCTAGGTTTCAGAACAGTCTCAAAAGTTACTGCAAGAGCCAAGAGAAGGAAGTAATATTTTTTGAGTGGGCTTCCATACGGGGCACTCATGCCAATCTTCAGGCCGTTCCCATTCCATCTTCCAAAGCAGTTATGGTTGAAAAAGCTTTCAATTTAGCTGCACAAAAGTTGGGATTTGAATTTATGGCTAAGAAATGTAAGTATTCTTCTTCAGAGCATGCTTTATATTTCATTGCTTATGAGGTCTGCTTCAGACCTGGATCCATTAATATTTCTGACGGAAGGGAGTTTTTGAAGACGCAAATTGATGGGAATTCAAGCTTGTTCTATGCTCAAGTCCCAGGAGGCACAATTCTGCTGCATCATGTTGACGAGAAAGAGAGATTTCCTGCTCAATTTGGTCGTGAGGTTCTGGCGGGGTTGCTTAATATAGCAGATAATGCTGATTGGAGGAATCTCAAACATAGCAAAGATGAAGAAGTGAAAATTGTTGAAGATTTCAAGAGCCAATTTCAAGAATATGATCCAAACTCGAATGCCATGATGATTATGGCAAAGAATCACCAAGCTGAGGTTGCTATTCTATCACTTAGGCTATATGCATCAGTCAACAAGCAGCTGCTGCATCCATGTTTTGAAACAGTCGGTGGCCCTGAAGGACCCTATTCAACCAACTAA 1983 0.4463 MAPRILLCGDVLGRLNQLFKRVSSVNKSAGPFDALLCVGQFFPDSPEQVEELTAYIEGGSHIPLPTYFIGDYGVAAPKILLQASKDSANRGFKMDGFKICDNLYWLRGSGKFPLFGLSVAYLSGRKSSSVQQFGTYTEDDVDALRAIAEEPGVVDFGITNRAAASDIPAGLSDAVGSDSTISELVQEIKPRYHIAGTKGIYYAREPYSNVDAVHVTRFIGLASVGNRDKQKFIHAISPTPASTMSSTEIAMKTTNTTLSPYTFVEKRTSPMDSTKRSSDSNSDSQYWRYDVPQKRQKHEAGHGDKLCFKFVSSGSCPRGEKCNFRHDIDAREQCMRGVCFDFLNKGKCERGSDCNFKHSLQDEGDKHPSRRSGRSKECWFCLSSPNVESHLIISIGGNYYLALAKGPLVEDHVLIIPVEHMPSTLSLPSESEIELSRFQNSLKSYCKSQEKEVIFFEWASIRGTHANLQAVPIPSSKAVMVEKAFNLAAQKLGFEFMAKKCKYSSSEHALYFIAYEVCFRPGSINISDGREFLKTQIDGNSSLFYAQVPGGTILLHHVDEKERFPAQFGREVLAGLLNIADNADWRNLKHSKDEEVKIVEDFKSQFQEYDPNSNAMMIMAKNHQAEVAILSLRLYASVNKQLLHPCFETVGGPEGPYSTN 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8600g00006 660 Gene3D - 291 360 - -
Mupr8600g00006 660 MobiDBLite consensus disorder prediction 264 285 - -
Mupr8600g00006 660 Pfam Protein similar to CwfJ C-terminus 2 532 610 IPR006767 -
Mupr8600g00006 660 SUPERFAMILY HIT-like 376 445 IPR036265 -
Mupr8600g00006 660 SMART c3hfinal6 335 360 IPR000571 GO:0046872
Mupr8600g00006 660 SMART c3hfinal6 303 328 IPR000571 GO:0046872
Mupr8600g00006 660 ProSiteProfiles Zinc finger C3H1-type profile. 306 329 IPR000571 GO:0046872
Mupr8600g00006 660 ProSiteProfiles Zinc finger C3H1-type profile. 338 361 IPR000571 GO:0046872
Mupr8600g00006 660 Pfam Protein similar to CwfJ C-terminus 1 369 485 IPR006768 -
Mupr8600g00006 660 CDD MPP_CWF19_N 6 224 - -
Mupr8600g00006 660 PANTHER CWF19, CELL CYCLE CONTROL PROTEIN 4 613 IPR040194 -
Mupr8600g00006 660 SUPERFAMILY CCCH zinc finger 304 330 IPR036855 GO:0046872
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Mupr8600g00006 CwfJ_C_1 4.5e-37 CL0265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8600g00006 K24939 - gmx:100782106 1059.67