Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8587g00001 ATGGCGAAGGGTGCCGATTCCGACGAGTTCGTCTTGCTTTCTAGGGTTCGTACGGGTCTGAAGAGGGAGTTTGCATTCGCCATGAAGGCTCAATCGGAGATCTGCGGTGGTTCCTTGGGCCGAACCCGGGCCAGCAAGAACCGGACCGAGGCGCTGGTTCAGCCAACCCCCGCACGCAAGCGGCCCAGGAAGTCCGAGGAGCAGAAAACCTCGGAGGATGTCATGAGCGAGGAAGAGGCCAAGAGTGACGTTGTGGATCTTCAGAGCGACGATGAACCGAAGAATCACGTTGGAGAATCTGCGCCAATGCCGGTTTGCGATGAAGAACCGAAGAGTGATCTCGTTTTGCAAACTGTTATCAGCGAGGAGGAACCGAAGAATGATTTGGTGTTGGAAACTGTTATCAGCGACGAGGAACCGAAGAATGATGCAGTTGTGGAAACTGTTATCAACGAAGAAGGACCTATTGTGGCTGAGACGTTGAGGGAAGAGGTTGTGGATGTGATTGCACAACCAATTTGCGAAATTAAAGAGGAAAAAATAGAGGAGCAATATCCTAGTGTGGCACCCATGGTTTTGGTCAATGACGATAAGGGGAAGAAGAAGAAGAGAATGCCGTTGGAGAAGCCGAGAAGGTTTACTCGGTCAGCGTTGAAGGTGAAATCTGAAGAAACAAATGGTGGGGAACATGTTAATGCTGTTGGAAGTGGTGATGGTGTTAAGAGGGAAACTGAAATTGAGATTTCGTTGTTAAAGCCTAGTCCAGCCTCGGTAAAAGGTTCGAATAGTAGGTTGAAGAGGTTTCCTACCAAGTTAAAGGACCTTCTGGCTACGGGGATTCTCGAGGGAATGCCAGTGAGGTACATTAGGGGAACGAAGGCTCGAAGACCTGGAGAAACAGCGTTTCAAGGAGTTATTCGAGACTCTGGGGTTTTGTGCTTTTGTGAGATTTGTAAGGGGATTGAGGTTGTCACACCCAGTCTGTTTGAGCTGCATGCTGGCAGTGCAAACAAGCGTCCCCCGGAGTATATTTACATTGGTGATGGAAGTAGTGGAAATACCCTCCGCGATGTCATGAATGCCTGCTGCACTTTTCCATTGGATTCCATGGAGGAAGCTGTCCAAAAGGTCCTTGGTGACTTCACTATGAAGAAATCTTCCATCTGTTTGAACTGCAGAGGAGCATGCAAGGGTGCATCGAGACTAGTATGTGATACATGCATGGGGTTGAAAGACTCTCAATCAAGCCCCTCTCAAACAGCTGCAGCTAGCAGCAAAAGAGTATCACCACCAGTTCAACCCAGATCACCAGAACCAGTTGTAGTTCCAAAACTATTAGACAATGAGATTCAGCCAAAATCATTAGGCAATGAGGTGCAGCCAAAATCATTAGACAATGAGGTGCAGCCAAAATCATTAGACAATGAGGTGCAGCCAAATTCATTAGACAACGGGAGGCAGCCAAATTCATTAAACAATGGTATGAAGCACAGTGCATCTCGTGGTAAGAGTCAGGGAAGACTAACTAGAAAGGATCTGCGCTTGCATAAGTTGGTATTTGAAGCAGATGTCTTGCCAGATGGAACTGAAGTAGCCTACTATGCTCATGGAAAGAAACTGTTGGTTGGTTACAAAAGGGGATATGGAATTTTTTGTACCTGCTGCAACTCTGAGGTTAGTGCCTCGCAGTTTGAAGCTCATGCTGGCTGGGCATCTCGACGCAAGCCTTACCTGCACATATACACATCTAATGGAATCTCACTCCATGAGTTGTCCATCTCTTTATCAAAAGATCGGAGGTTTTCCAACAATGATAATGATGATCTCTGCATCATATGTGAAGATGGAGGGGATCTTTTGTGTTGTGATGGATGCCCTAGAGCTTTTCACATAGATTGTGTCCCTCTACCATGCATTCCTAGTGGTACTTGGTATTGTAAGTATTGCCAGAATGTTTTCCAGAAAGACAGGCATGGGGAGCATAATGTGAATGCTCTGGCAGCTGGAAGGGTTGCAGGCACTGATATTTTGGAACAGATGAACCCAAGATGCATTCGTGTTGTCAAATCTGTCGAAGTTTATCATGGTGGATGTGCCTTGTGCAGTCGTCACAATTTCAGTAAAAGCTTTGGTCCTCGGACAGTAATTATTTGTGATCAGTGTGAGAAAGAATATCATGTTGGATGTTTAAAGGATCATAACATGCAAAACCTAGAGGAATTGCCTGAAGGGGATTGGTTCTGTAGCATAAATTGCAATCAAATTCATTCTGCACTGGTGGATTTGGTTGCTTGTAAAGAGCAGAATATTCCAGATTCCCTTCTAAGTTTGATTAAAAAGAAGCATGAAGAGAAAAGTTTGGACATTGGAGCTCTTGATATTAAATGGAGGGTTATGAATTGGAAACTAGATTCTTCTCATTCTGAAACTAAGAAATTAGATTCTTCTCATTCCGATACTAGGAAATTGCTTTCAAGAGCTGTTGCCATTTTCCATGAGAGGTTTGATCCTATAGTTGATTCGACATCTGGCCGTGATTTCATTCCAACCATGTTGTTTGGAAGGAACATTCGTGGTCAGGATTTTGGTGGAATGTACTGTGCAGTGCTCACTGTCAACCAGGTTGTCGTGTCTGCTGGAGTATTTCGCATCTTTGGGTCAGAAATAGCAGAGCTTCCATTAGTGGCGACAACTGCTGATCATCAGGGACAGTGCCTGTTTTCTTGCATTGAGATGCTACTTGGATCTTTAAATGTGAGAAATCTTGTCCTACCTGCTGCTGATGAAGCTGAATCAATATGGACCGGTAAATTTGGGTTTACAAAGCTATCGCAAGATGAGATAAACAATTATAAGAAGTTTTATCGCATGATGATATTTCAAGGGACCTCGGTGGATGCGTTTGCTGAGTCAGCGTTCAAGGGGAACCCTGCTGCTGTGTGTTTCTTAGAAGAGGAGAGAGACGATGAGTGGTTGCAAGCAGTAGCCACTGAGTTCAATATCTCTGAGACCTGTTACTTATCTCGCATCTCTCTCTCGCTCCATGGAACCTCTTATCCCCGTTTTCGTCTCAGATGGTTTACTCCTGTTGCTGAGGTTAAACTTTGTGGCCATGCCACATTAGCTGCTGCGCACACACTATTTTCATCTGGTTTGGTGGATACAGATGTTATTGAATTTGTGACGCTATCTGGAGTATTAACTGCCAAAAAGATCCCAGCGATCCATATCACTAATGCCTCAAACTTGCAAAAGGGTGAAGCTCAGGACGGGTTTTACATTGAATTGGATTTTCCTGTTGATCCTGTTACAGAATTCAGCTTTGATGACAGTACTTCACAAATTTCTGGGGCATTGAGCGGTGCTTCCATAATTGATATAAATAGGACACAGATTGGAGATGACTTACTTGTTGCAGTCACATCCGGAAAAGCTATCACAGAACTACAGCCACAACTTGATGCAATAGTTAAATTGCCTGGAAGGGGGTTAATTGTTTCGGGGACTGCTCCTCCAGGTTCGGGATTTGACTTATATAGTCGATTCTTTTGCCCAAAATTGGGAATCAATGAGGATCCTGTTTGTGGGAGTGCACATTGTGCATTGGCATCCTACTGGAGCAAGAAGCTGGGGAAATGTGATTTCAATGCTTATCAGGCATCACCAAGAGGGGGTATTCTCAATATTCATCTTAATGAGCAGACCCAAAGAGTGCTTTTGCGTGGGAAGGCTGTTACCGTGATGGAAGGGTGTGTTCTGAATTCCAAAAGAAGCCATCCACTACAGCTTGAGCTTTACAAAAAAAGGAAAATTAAAATCCTAAGAGCTAGTAAACTTGGTAACAGCCTTAGTCCCTTCAGAGACGGCATGCTTGGCAAGCTCCCCGGGCAGAACCAACCTGACCGCGGTCTGAATCTCCCTGGACGTGATGGTAGGCTTCTTGTTGTAGCGAGCGAGTCTGGAAGATTCCTGAGCAAGCTTCTCGAAGATATCGTTGATGAAGCTGTTCATGATTCCCATGGCTTTGCTCGAAATACCAATGTCAGGGTGCACCTGCTTCAACACCTTGAAGATGTATATCTTGTACGTCTCCACACTCTTCTTCGTCCTCTTCTTCTTCTTGTTTTTTCTCTTGGATTTGATTGGTCAGAAGGGGTAGACCGCGGATCG 4170 0.4494 MAKGADSDEFVLLSRVRTGLKREFAFAMKAQSEICGGSLGRTRASKNRTEALVQPTPARKRPRKSEEQKTSEDVMSEEEAKSDVVDLQSDDEPKNHVGESAPMPVCDEEPKSDLVLQTVISEEEPKNDLVLETVISDEEPKNDAVVETVINEEGPIVAETLREEVVDVIAQPICEIKEEKIEEQYPSVAPMVLVNDDKGKKKKRMPLEKPRRFTRSALKVKSEETNGGEHVNAVGSGDGVKRETEIEISLLKPSPASVKGSNSRLKRFPTKLKDLLATGILEGMPVRYIRGTKARRPGETAFQGVIRDSGVLCFCEICKGIEVVTPSLFELHAGSANKRPPEYIYIGDGSSGNTLRDVMNACCTFPLDSMEEAVQKVLGDFTMKKSSICLNCRGACKGASRLVCDTCMGLKDSQSSPSQTAAASSKRVSPPVQPRSPEPVVVPKLLDNEIQPKSLGNEVQPKSLDNEVQPKSLDNEVQPNSLDNGRQPNSLNNGMKHSASRGKSQGRLTRKDLRLHKLVFEADVLPDGTEVAYYAHGKKLLVGYKRGYGIFCTCCNSEVSASQFEAHAGWASRRKPYLHIYTSNGISLHELSISLSKDRRFSNNDNDDLCIICEDGGDLLCCDGCPRAFHIDCVPLPCIPSGTWYCKYCQNVFQKDRHGEHNVNALAAGRVAGTDILEQMNPRCIRVVKSVEVYHGGCALCSRHNFSKSFGPRTVIICDQCEKEYHVGCLKDHNMQNLEELPEGDWFCSINCNQIHSALVDLVACKEQNIPDSLLSLIKKKHEEKSLDIGALDIKWRVMNWKLDSSHSETKKLDSSHSDTRKLLSRAVAIFHERFDPIVDSTSGRDFIPTMLFGRNIRGQDFGGMYCAVLTVNQVVVSAGVFRIFGSEIAELPLVATTADHQGQCLFSCIEMLLGSLNVRNLVLPAADEAESIWTGKFGFTKLSQDEINNYKKFYRMMIFQGTSVDAFAESAFKGNPAAVCFLEEERDDEWLQAVATEFNISETCYLSRISLSLHGTSYPRFRLRWFTPVAEVKLCGHATLAAAHTLFSSGLVDTDVIEFVTLSGVLTAKKIPAIHITNASNLQKGEAQDGFYIELDFPVDPVTEFSFDDSTSQISGALSGASIIDINRTQIGDDLLVAVTSGKAITELQPQLDAIVKLPGRGLIVSGTAPPGSGFDLYSRFFCPKLGINEDPVCGSAHCALASYWSKKLGKCDFNAYQASPRGGILNIHLNEQTQRVLLRGKAVTVMEGCVLNSKRSHPLQLELYKKRKIKILRASKLGNSLSPFRDGMLGKLPGQNQPDRGLNLPGRDGRLLVVASESGRFLSKLLEDIVDEAVHDSHGFARNTNVRVHLLQHLEDVYLVRLHTLLRPLLLLVFSLGFDWSEGVDRGS 1390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8587g00001 1390 Pfam Tify domain binding domain 304 362 IPR032308 -
Mupr8587g00001 1390 Pfam Tify domain binding domain 544 591 IPR032308 -
Mupr8587g00001 1390 SUPERFAMILY FYVE/PHD zinc finger 597 651 IPR011011 -
Mupr8587g00001 1390 ProSiteProfiles Zinc finger PHD-type profile. 607 652 IPR019787 -
Mupr8587g00001 1390 MobiDBLite consensus disorder prediction 57 97 - -
Mupr8587g00001 1390 MobiDBLite consensus disorder prediction 414 508 - -
Mupr8587g00001 1390 MobiDBLite consensus disorder prediction 453 502 - -
Mupr8587g00001 1390 FunFam Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain 596 673 - -
Mupr8587g00001 1390 SUPERFAMILY FYVE/PHD zinc finger 695 751 IPR011011 -
Mupr8587g00001 1390 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 695 755 IPR013083 -
Mupr8587g00001 1390 CDD PHD1_AIRE 609 649 - -
Mupr8587g00001 1390 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 596 682 IPR013083 -
Mupr8587g00001 1390 SUPERFAMILY Diaminopimelate epimerase-like 963 1252 - -
Mupr8587g00001 1390 MobiDBLite consensus disorder prediction 35 108 - -
Mupr8587g00001 1390 MobiDBLite consensus disorder prediction 414 431 - -
Mupr8587g00001 1390 PANTHER AUTOIMMUNE REGULATOR 64 965 - -
Mupr8587g00001 1390 Gene3D Diaminopimelate Epimerase; Chain A, domain 1 1100 1242 - -
Mupr8587g00001 1390 MobiDBLite consensus disorder prediction 219 238 - -
Mupr8587g00001 1390 SMART PHD_3 609 650 IPR001965 -
Mupr8587g00001 1390 SMART PHD_3 697 752 IPR001965 -
Mupr8587g00001 1390 ProSitePatterns Zinc finger PHD-type signature. 610 649 IPR019786 -
Mupr8587g00001 1390 Gene3D Diaminopimelate Epimerase; Chain A, domain 1 965 1250 - -
Mupr8587g00001 1390 Pfam Phenazine biosynthesis-like protein 965 1250 IPR003719 GO:0003824|GO:0009058
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8587g00001 Mupr-Chr8587 7703 20788 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8587g00001 35 965 PHD Transcription Factor Family AT2G36720 37.780 0.0 608
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8587g00001 - - gmx:100803825 1486.47