Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8586g00001 ATGAAGCAGGTGGAGGGCCCTGAAGAAACTTGGGTGTGGGGTTTTGTCTTACATGAAGTGAGGTCAATTAGGAATGGAGAAAGATCACAACTATTCGGTACAGACACAGCTCTCTTCCGTGGCTCTTTTATGTTTTTGGCTCCATTAAAGCTTTTCATGTCAGATCTTTTCACTCTCTCATATCATCACCATATGTTGCTTTGCTCCAATTTTGTTGAACCGTCACTGCAGGCACCATCCATGCCTCCAAGCTTCAACACACTTGACTACTCTCTAGACCAACACCATCTCTATTCAGCAAATCATCAACAACACCAACACCTCATGAAGTTCCAAACTGATGAAAACAACAATGGATCAATGGTGGATTACATGCCCCAAACATGTACACCACCACCACCACATGGCTTTTATGGTACTAGCACTGCCACAACATCTTATGATAAACTGAGTTTTGCAGATGTGATGCAGTTTGCAGATTTTGGACCCAAGTTGGCCCTAAACCAAGCAAAAAATTGTGAAGAACCTGGGATAGACCCGGTTTATTTTCTCAAGTTTCCTGTGTTGAACGACAAGATGGAGGAGGAGCAGAATCTGATGGTGGATAATGACCCTGATGGTGAAGGAGAAAATCATGATGAGAGGTTCAACATGGTGAGTGCAGAAGATAAAAGGGTTGCTGCAGAAGAGGGAATGGTGATGGGAGAAGATGAAGAGACTCGTGTTTCTGATGACAACAACAACTCGGTGCAGATTCGGTTTCTTGGTCACGAAGAGCCTCAGAAAGTGCAGGAGAACAAGAACAAGAGGAAGAGACCAAGATCTGTTAAGACAAGTGAAGAGGTTGAAAGCCAGCGCATGACTCACATAGCGGTTGAAAGGAACCGTAGGAAGCAAATGAATGAGCATCTTCGTGTCCTTAGATCCCTCATGCCTGGTTCATACGTCCAAAGGGGTGATCAAGCTTCTATAATTGGGGGGGCTATAGAGTTTGTAAGGGAGTTAGAGCAACTTCTTCAGTGTTTGGAATCACAAAAGAGGAGGAGGCTACTTGGAGAGGCACAAGCAAGACAAGTTGGGGACCCCTCTCTTTCGGTTCAACAGCCTCCTTTCTTTCCACCTTTGCCTATTCCGAATGAGCAGATGAAGATTGTGGAGTTGGAGACTGGACTTCGCGAAGAAACCGCGGAGAGTAAGTCTTGTTTGGCTGATGTTGAAGTGAAGCTTCTAGGATTTGATGCCATGATCAAAATCTTGTCAAGGAGAAGGCCAGGACAATTGATCAAGACCATTGCTGCACTTGAAGATCTCCAACTAATCATCCTCCACACCAACATCACCACCATTGAACAAACAGTTCTTTATTCATTCAATGTCAAGGTGGCTAGTGATTCAAGGTTCACCGCAGAAGATATAGCCAGCTCGGTTCAGCAGATATTCAATTTTATCCATGCAAACACTAGCATGTGCTGTATTCGTACAAGAATTACTTGTGATTCCTATAGTTGTCTTTATGAGATAACCGATATTGATTTTACACCACCGCTTGCATCCTATGTCCATAGGATTTACTATTGTTATTGTCGCATTGAAGCAAGGGGTGACTGA 1608 0.4384 MKQVEGPEETWVWGFVLHEVRSIRNGERSQLFGTDTALFRGSFMFLAPLKLFMSDLFTLSYHHHMLLCSNFVEPSLQAPSMPPSFNTLDYSLDQHHLYSANHQQHQHLMKFQTDENNNGSMVDYMPQTCTPPPPHGFYGTSTATTSYDKLSFADVMQFADFGPKLALNQAKNCEEPGIDPVYFLKFPVLNDKMEEEQNLMVDNDPDGEGENHDERFNMVSAEDKRVAAEEGMVMGEDEETRVSDDNNNSVQIRFLGHEEPQKVQENKNKRKRPRSVKTSEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLESQKRRRLLGEAQARQVGDPSLSVQQPPFFPPLPIPNEQMKIVELETGLREETAESKSCLADVEVKLLGFDAMIKILSRRRPGQLIKTIAALEDLQLIILHTNITTIEQTVLYSFNVKVASDSRFTAEDIASSVQQIFNFIHANTSMCCIRTRITCDSYSCLYEITDIDFTPPLASYVHRIYYCYCRIEARGD 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8586g00001 535 Gene3D - 274 350 IPR036638 GO:0046983
Mupr8586g00001 535 MobiDBLite consensus disorder prediction 253 286 - -
Mupr8586g00001 535 Pfam Helix-loop-helix DNA-binding domain 285 336 IPR011598 GO:0046983
Mupr8586g00001 535 CDD bHLH_AtFAMA_like 287 354 - -
Mupr8586g00001 535 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 284 335 IPR011598 GO:0046983
Mupr8586g00001 535 FunFam Basic helix-loop-helix transcription factor 275 350 - -
Mupr8586g00001 535 SMART finulus 290 341 IPR011598 GO:0046983
Mupr8586g00001 535 PANTHER TRANSCRIPTION FACTOR FAMA 200 480 IPR044283 GO:0003700|GO:0010052
Mupr8586g00001 535 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 284 350 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8586g00001 Mupr-Chr8586 2907 5321 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8586g00001 114 489 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G24140 60.442 3.07e-146 424
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr8586g00001 HLH 1.3e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8586g00001 K26213 - gmx:100813515 658.292