Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8585g00008 TTATTAGCCTCACATTTGGACTATAGTGGTGGATGCTGCGGTGGTGCGTGTTTCTTAAGACCTATGGCTAGTCCAACTGGAGAATTGACAAGCTGTAAGGACGGTACCGCCGAGCGGATGGGAACTGAACAATGTGAATTGTCTGAAAAAACACAGATAGGCTCTGAAGGTTTAGAGAGGGAACAAAGGGATCTTGGTACTGCATTGACCGGTTCAGTTATTGACGAAAAAACAAATCAAGTTTCTGCCAATGTGGTGGAGAATTCTGTTATTCTACTGCCTGCCCCGCCTCAACATGACTTTGAAAAGAGTTGTCAGAGTGTAGAAGGTTCATGCCTTCATCAAAGTGCCATTGAACAAGTCTCTGTTCATTTACCTAGTGATCAAACCGAAAACAAAGGCCAATTAATGTCGGAAAACGTTCAAAATGAACCTGTGGAATCCACTCCTGCCTTCGTTGTTGAAGGCCAAATGCAATCCAGTCCAGCTCAAGCGAACGTAAGTTCTGTGAATGAATTGTTGGATCCACCTTCTGGAGATGTTGTGAACAATATTAGTTCCAATTGTTCAGAAAGAATGTCTAATAGCCCAACCCATTTGCAATTAAGGCACAGGGGTAAAAGAAATTCTAAATTATTGAAGAAGAAGTATATGCTAAGGTCGTTAGGAAGCAGTGACAGAGCTTTGCGGTCAAAAACAATAGAAAAACCTAAAGAACCAGAGCCAAATAGTAACTTGGTTGATGGTAACAATGATGGAGTGAAGAGGAAAAGTAGGAGGAAGAAGAAAAAGAGAAGAGAGGAGGGAATTACTGATCAGTTTTCTAGAATCAGATCTCACTTAAGATATTTATTAAACCGAATAAGTTATGAGAAAAGCTTGATTGATGCTTATTCTGGCGAGGGCTGGAAAGGATACAGTATGGAAAAATTAAAGCCTGAGAAGGAGCTTCAGCGGGCCAAGTCTGAAATTCTTCGACGCAAATTGAAAATTAGGGATCTATTTCAAAATTTGGATTCATTGTGTGCTGAAGGAAAGCTTCCAGAATCTTTGTTTGATTCTGAGGGAGAGATTGACAGCGAGGATATATTCTGTGCAAAATGCCAATCCAAAGAGTTGAGCACTAATAATGATATAATTCTCTGTGATGGTGTTTGTGACCGTGGATTTCACCAGCTATGTTTGGTTCCTCCACTATTAACTGAAGACATTCCTCCTGGCGATGAGGGTTGGTTATGCCCAGGATGTGATTGCAAAGATGACTGCATGGACCTTGTTAACGACTCCTTTGGAACAAGTCTCTCTCTTAGTGACACCTGGGAGAGGGTCTTTCCTGAAGCAGCAACAGCTACTGGAAATAATATGGATAGCAACTTGGGACTTCCTTCTGATGATTCTGATGATGATGATTATAATCCTAATGGTCCAGAGGATGTGAAAGTTGAAGGAGATGAGTCAAGTTCTGACGAATCTGAGTATGCTTCTGCTTCTGAGAAATTGGAGGGTTTACATGAGGATCAATGCTTGGGTCTTCCATCTGAAGATTCTAGTGATGGTGATTATGATCCTAATGCTCCAGATGTTGACTGTAAAGTCAATGAAGAGACTTCAAGCTCTGATTTCACATCTGACTCTGAGGATCTTGCTGCTGCAATTGAGGATAACATGTCCCCTGGACAGGATGGAGACATCAGATCTGCATCATTGGATGATGTTAAGTACTTGAAAAGTTCTAGCAAACAAAAGGGTAAAGTTGGTAAGAAGCTAACTATGGCTGATGAACTGTCATCTTTACTAGAGCCAGATTCTGGCCAAGAGGATTCCACTCCTGTTTCTGGGAAAAGACGTGTGGAAAGGTTGGACTACAAAAAGCTGTATGATGAGACGTACTGCAGTGATACTAGTGATGATGAAGATTGGACTGCCACTGCTACTCCAAGTAGAGAAAAGAAACTCACTGACAATGTGACTCCAGTGTCACCAAATGGAAATGCTTCAAATAATTCTATGCATATTCCCAAGAGGAATAAGAATAAAGTTGAAAATACAAATAACTCACACACTAAATCACTTGATGGCTGTGTAAAATCTGGTTCCATGGATAAAAAGTCTGGATCTTCAGCACACAAAAGACTAGGAGAAGCTGCAGTTCAGAGACTTCACAAATCTTTTAAAGAAAATCAGTATCCAGATAGAACCACAAAAGAAAAGTTGGCACAAGAAATTGGACTTAATTATCAGCAGGTTGCCAAATGGTTTGACAATAATCGATGGAGCTTCCGGCATTCATCGCAAATGGAAACCAATTCGGGTAGAAATGCTTCACAGCGAGCTGCTGTGGGTGGAGCTGAAACTGAGGGGGAGAAGGAATATGAATTAATGTCGTCAGAGGTCAGTGGAGAAAAATCAAAAACTCCAAGCTCTAGAAAAAGAAAGCATTTGTCAGAACCCGAAGCACATGAAGCACGACTGGATATCAATGGTTCCTCAGCAACTATCTCAACTGTAAGTCAGGAGTTAGCAAGTACTGAGATGGATTTGGAAGTCGACGAGAACGACTTGAAAGCCGCCGGCGCGGAACTCTTCACCCACGGTGGCCGGCGAGGCATTCGCATGAATGGCTGGCTGATTGAGTCTCGGAGGCATTCCATACTGAATTCTTCCACCCTCCAAGAGTGGGAACAAAAACTAGAAACGTCTCATTTACCCGAAATGGTTTTTGGGGAAAACACTTTAATTCTAAAGCACTTGAGTAGTGGCACCAAAATACATTTTAATGCATTTGATGCTCTACGTGGCTGGAAACAGGAAGCCTTGCCCCCAGTTGAAGTTCCTGCAGCTGCTCAATGGAAATTTAGAAGCAAGCCATCTCAGCAAGTAATACCAGATTACGACTATACATTTACGACGCCTTATTGCGGAAGTGGCACCATTGAGATTGATAGAGATCTGAATGGGAGAGAGATTTCTAAGGAGACAAGCGATATCCATTGGGAAGACTGCAAGGATCAAATTGATGTAGTTGCACTTGCATCCAAGGAGCCCATACTTTTCTATGATGAGGTGGTATTATATGAGGATGAACTTGCTGATAATGGAGCATCACTTCTTACCGTAAAAGTGCTTAGAGTTGATGGAGTGTTGATTAGACTGAGAGAAACACGTATGCATTGTGTATTTGGTGGAAGTACAAATCCCATTATACTTCGAGAGAGTTGCTGGAGAGAATCTACATTTCAAGCTTTGTCTGCAAAAGGGCACCCTATTGATTCTGCTGCGTATGGTGATCCAAGCATCATCAGCCAGAGGCTCCCCATCATAATGCATACGACCCAAAAGCTTGTAATTTCCTCTTAA 3357 0.4188 LLASHLDYSGGCCGGACFLRPMASPTGELTSCKDGTAERMGTEQCELSEKTQIGSEGLEREQRDLGTALTGSVIDEKTNQVSANVVENSVILLPAPPQHDFEKSCQSVEGSCLHQSAIEQVSVHLPSDQTENKGQLMSENVQNEPVESTPAFVVEGQMQSSPAQANVSSVNELLDPPSGDVVNNISSNCSERMSNSPTHLQLRHRGKRNSKLLKKKYMLRSLGSSDRALRSKTIEKPKEPEPNSNLVDGNNDGVKRKSRRKKKKRREEGITDQFSRIRSHLRYLLNRISYEKSLIDAYSGEGWKGYSMEKLKPEKELQRAKSEILRRKLKIRDLFQNLDSLCAEGKLPESLFDSEGEIDSEDIFCAKCQSKELSTNNDIILCDGVCDRGFHQLCLVPPLLTEDIPPGDEGWLCPGCDCKDDCMDLVNDSFGTSLSLSDTWERVFPEAATATGNNMDSNLGLPSDDSDDDDYNPNGPEDVKVEGDESSSDESEYASASEKLEGLHEDQCLGLPSEDSSDGDYDPNAPDVDCKVNEETSSSDFTSDSEDLAAAIEDNMSPGQDGDIRSASLDDVKYLKSSSKQKGKVGKKLTMADELSSLLEPDSGQEDSTPVSGKRRVERLDYKKLYDETYCSDTSDDEDWTATATPSREKKLTDNVTPVSPNGNASNNSMHIPKRNKNKVENTNNSHTKSLDGCVKSGSMDKKSGSSAHKRLGEAAVQRLHKSFKENQYPDRTTKEKLAQEIGLNYQQVAKWFDNNRWSFRHSSQMETNSGRNASQRAAVGGAETEGEKEYELMSSEVSGEKSKTPSSRKRKHLSEPEAHEARLDINGSSATISTVSQELASTEMDLEVDENDLKAAGAELFTHGGRRGIRMNGWLIESRRHSILNSSTLQEWEQKLETSHLPEMVFGENTLILKHLSSGTKIHFNAFDALRGWKQEALPPVEVPAAAQWKFRSKPSQQVIPDYDYTFTTPYCGSGTIEIDRDLNGREISKETSDIHWEDCKDQIDVVALASKEPILFYDEVVLYEDELADNGASLLTVKVLRVDGVLIRLRETRMHCVFGGSTNPIILRESCWRESTFQALSAKGHPIDSAAYGDPSIISQRLPIIMHTTQKLVISS 1118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8585g00008 1118 Pfam PHD-finger 364 419 IPR019787 -
Mupr8585g00008 1118 SUPERFAMILY Homeodomain-like 704 766 IPR009057 -
Mupr8585g00008 1118 FunFam Homeobox protein HAT3.1 705 774 - -
Mupr8585g00008 1118 MobiDBLite consensus disorder prediction 448 566 - -
Mupr8585g00008 1118 MobiDBLite consensus disorder prediction 631 711 - -
Mupr8585g00008 1118 ProSiteProfiles 'Homeobox' domain profile. 703 763 IPR001356 GO:0003677
Mupr8585g00008 1118 MobiDBLite consensus disorder prediction 531 545 - -
Mupr8585g00008 1118 Gene3D - 700 771 - -
Mupr8585g00008 1118 Pfam TIP41-like family 905 1082 IPR007303 GO:0043666
Mupr8585g00008 1118 SUPERFAMILY FYVE/PHD zinc finger 354 422 IPR011011 -
Mupr8585g00008 1118 MobiDBLite consensus disorder prediction 636 673 - -
Mupr8585g00008 1118 CDD PHD_PRHA_like 364 416 IPR045876 -
Mupr8585g00008 1118 SMART PHD_3 364 417 IPR001965 -
Mupr8585g00008 1118 SMART HOX_1 705 767 IPR001356 GO:0003677
Mupr8585g00008 1118 MobiDBLite consensus disorder prediction 783 797 - -
Mupr8585g00008 1118 FunFam Homeobox protein HAT3.1 345 423 - -
Mupr8585g00008 1118 MobiDBLite consensus disorder prediction 596 619 - -
Mupr8585g00008 1118 ProSiteProfiles Zinc finger PHD-type profile. 362 419 IPR019787 -
Mupr8585g00008 1118 MobiDBLite consensus disorder prediction 224 271 - -
Mupr8585g00008 1118 CDD homeodomain 711 764 IPR001356 GO:0003677
Mupr8585g00008 1118 MobiDBLite consensus disorder prediction 180 200 - -
Mupr8585g00008 1118 Pfam Homeodomain 715 759 IPR001356 GO:0003677
Mupr8585g00008 1118 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 357 413 IPR013083 -
Mupr8585g00008 1118 ProSitePatterns Zinc finger PHD-type signature. 365 416 IPR019786 -
Mupr8585g00008 1118 PANTHER POLYCOMB-LIKE TRANSCRIPTION FACTOR 159 827 - -
Mupr8585g00008 1118 MobiDBLite consensus disorder prediction 764 820 - -
Mupr8585g00008 1118 MobiDBLite consensus disorder prediction 163 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8585g00008 Mupr-Chr8585 50331 66622 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8585g00008 222 813 Homeobox Transcription Factor Family AT3G19510 44.231 4.75e-126 401
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-PHD Mupr8585g00008 TIP41 1e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8585g00008 - - gmx:100306715 1280