Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8585g00007 ATGACTTGCAACCATCCCCTTCCCTCTGAGATCCTCTTCTTTAAGATTATTCTCTATACAACTCTTCAACATGGAAAGCTTAAGATTCCAAACAAGTTCACTAGAGAACATGGTGCTAATCTGTCAAACCCACTGTTTCTCAAGCTTCCAGATGGCATTGAATGGAAAGTTTATTGGACCAAAGATGATGGTGGTGGTATTTGGTTTCAGAAGGGATGGAAAGAATTTGCTGCATATTACTCCCTAAATCAGGGACATTTATTGCTGTTTAAATACCAAGAAACATGTCATTTGGAGGTACATATATTTGACCAGAGTACCCTTGAAATAAGTTATCCCTCCCACCCGACCCAAAATGAAAATGACAACATTGACCACATTAGCAATAAACCTGTTCAAGTTTTGGACGAGGTGACTTCAATTCAAAAGACTAAACTTAAATCAACAATATCATGTCCTAAACCTCAGTCTCAAAAAACAGGCTCAAGTGGAGTTGTTGGACAAAGCTCCAATTTGCTTCAGCATGTACAAATTAAAGGTGAACAGTCTCAATTTACTAATTTTGCCAGGTCATCTGACAAGGAAGTGACTCCAAGTCATAAGACTAAGCTGAAATCAATAATACCAGGTCCTCAACCACAGGATATGGGTGGTGCCACCGAAAGCCAAAAAGTGGAGCGGTTAATTTCTAAAGCTACAAACAGAGCTGCAACCTCCGAGTCTAAAGGTCCCTCTTTTATGGTTGTCTTGCAGCCTTCCTACGCATATGGATATTCCATGATAATTCCAACAGCATTTGCAAAAAAGTATTTGAAGGAAAAGCCAAGGGATGATATCCTGCTTCGGAACTTGGATGGGAGAACTTGGCTCATTAGTTTTAGGCTCGGCAGATTTCGCAAGGGATGGAAGACATTTGTATCAGATAATCATTTGAATGCGGGGGATGTTTGTCTTTTTGAGCTCACCAAGAGCGGAGGCCACTGTTTTCAAGTATCATTCATTCGGCTTTCACAAGAAACACAATCACCAGGAGATGGAGACCCTGGGAGGATCCCAGATTCGAAATGTATAAGTGCTCTTCCCATCAAAGCTATGCAAGAAGCTAGAAAGTTCACCTCGGAAAATCCCTTTTTCAGAGTCATTATAAAGGCAAATTGTAATAGGGATTTTAGACCGCGTGTACCAGTTGCGTTCGTGAGAAAGCACTTGGGTGAGAAGCAAATTGTAATGTTACAGTTTTTAAAGAAGTCGTGGCATGTAAACATCATTGGCGACGTACGAACAAAGTTGTCCAAGGGTTGGACCAAATTTGCCATTGAAAGCAAATTGCGACAGGGAGATGTTTGCATATTTGAGTTAATCGACAAAGCAAATGCATTGAATAAGGAATTTGAAGCTTGA 1401 0.4047 MTCNHPLPSEILFFKIILYTTLQHGKLKIPNKFTREHGANLSNPLFLKLPDGIEWKVYWTKDDGGGIWFQKGWKEFAAYYSLNQGHLLLFKYQETCHLEVHIFDQSTLEISYPSHPTQNENDNIDHISNKPVQVLDEVTSIQKTKLKSTISCPKPQSQKTGSSGVVGQSSNLLQHVQIKGEQSQFTNFARSSDKEVTPSHKTKLKSIIPGPQPQDMGGATESQKVERLISKATNRAATSESKGPSFMVVLQPSYAYGYSMIIPTAFAKKYLKEKPRDDILLRNLDGRTWLISFRLGRFRKGWKTFVSDNHLNAGDVCLFELTKSGGHCFQVSFIRLSQETQSPGDGDPGRIPDSKCISALPIKAMQEARKFTSENPFFRVIIKANCNRDFRPRVPVAFVRKHLGEKQIVMLQFLKKSWHVNIIGDVRTKLSKGWTKFAIESKLRQGDVCIFELIDKANALNKEFEA 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8585g00007 466 SUPERFAMILY DNA-binding pseudobarrel domain 239 336 IPR015300 -
Mupr8585g00007 466 SUPERFAMILY DNA-binding pseudobarrel domain 9 106 IPR015300 -
Mupr8585g00007 466 MobiDBLite consensus disorder prediction 187 221 - -
Mupr8585g00007 466 ProSiteProfiles B3 DNA-binding domain profile. 377 466 IPR003340 GO:0003677
Mupr8585g00007 466 ProSiteProfiles B3 DNA-binding domain profile. 245 337 IPR003340 GO:0003677
Mupr8585g00007 466 PANTHER B3 DOMAIN-CONTAINING 238 456 - -
Mupr8585g00007 466 CDD B3_DNA 377 456 IPR003340 GO:0003677
Mupr8585g00007 466 CDD B3_DNA 12 104 IPR003340 GO:0003677
Mupr8585g00007 466 CDD B3_DNA 244 335 IPR003340 GO:0003677
Mupr8585g00007 466 SUPERFAMILY DNA-binding pseudobarrel domain 371 456 IPR015300 -
Mupr8585g00007 466 SMART B3_2 246 335 IPR003340 GO:0003677
Mupr8585g00007 466 SMART B3_2 377 463 IPR003340 GO:0003677
Mupr8585g00007 466 SMART B3_2 13 106 IPR003340 GO:0003677
Mupr8585g00007 466 ProSiteProfiles B3 DNA-binding domain profile. 12 106 IPR003340 GO:0003677
Mupr8585g00007 466 Gene3D - 226 338 IPR015300 -
Mupr8585g00007 466 Gene3D - 362 463 IPR015300 -
Mupr8585g00007 466 Gene3D - 9 107 IPR015300 -
Mupr8585g00007 466 Pfam B3 DNA binding domain 246 331 IPR003340 GO:0003677
Mupr8585g00007 466 Pfam B3 DNA binding domain 21 105 IPR003340 GO:0003677
Mupr8585g00007 466 Pfam B3 DNA binding domain 377 456 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8585g00007 Mupr-Chr8585 44228 47240 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8585g00007 363 454 B3 DNA Binding Superfamily AT3G18990 35.789 9.29e-12 64.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mupr8585g00007 B3 5.3e-10 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8585g00007 - - ccaj:109813514 532.717