Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8573g00004 ATGGAGCAACTTTCTCGGGAAATCATTCTCCCTCTGATTCTGTTCATTGTTTTTTCTTTCCGAGTGTGTAGAGCAGTGGATTGTGGTGGCACGCAAGTTTCACGTACCATCGTAGTTGATCAGTCTGGTAAATCAGATTTCAAAACGATTCAAAAAGCTGTTAACTCAGTAGCTACAAACAACAATCGATGGGTAAAAATTCACATAAATGCGGGCACATACAAAGAGCAGGTTCAAATCCCATCTACAAAGCCATGTATTATTTTGGAAGGCCGAGGCAAAGACATCACCACTATTACATACAATGACCACCAAAGAACAGATATCAGTGCCACGTTCTCGTCGTATCCAAACAACGTTGTTGCAAAGGGCATTACTTTTGAGAACTCGTTCGATATTGCGGCAGGGTTGAATTTGCAAGGGAGGAAAATGGAAAATTGTGGGAGCCACGCCCCAGCATTGGCAGCAAGGATATATGGAGACAAATGTGCCTTTTACGATTGTAATTTCATCGGTTTTCAAGATACCTTGTGGGATGTTCAAGGTCGTCACTACTTTAAAAATTGTCACATTAAAGGTGCCGTAGACTTCATATTTGGCAATGGACAGTCCTATTACGAGGATTGCGTGGTCAATGCGACTTCCCCAGGTTACATAACAGCACAAGGACGCAGTTCAAATAGCGAGCTAAGTGGTTTTGTGTTCCGACGGGGTTCTGTGGTTGGTAGTGGGAGCTCCTTATTAGGAAGAGCCTATGGTCCTTGTTCTAGAGTTATTTTTCAAGAGACTAACTTAGGTTCTGTGGTTGACCCTAGAGGATGGGATGCTTGGAATTTTACAAAACATACGGGCTGTATTTCCTACGCTGAGATTGAGTGTTCAGGGGCGGGTGCCAATACTTCCAAACGCGTTCCTTGGATGAAAAAGTTGAAGACTTCAGCATTAAGAGGACAATTTTCGAAGTCAAAGTTCATCAACCAAGATTCTTGGCTCACAAAATTACCACTAAATCGGCGACATCTTTTTCTTAAAATTTAA 1038 0.4229 MEQLSREIILPLILFIVFSFRVCRAVDCGGTQVSRTIVVDQSGKSDFKTIQKAVNSVATNNNRWVKIHINAGTYKEQVQIPSTKPCIILEGRGKDITTITYNDHQRTDISATFSSYPNNVVAKGITFENSFDIAAGLNLQGRKMENCGSHAPALAARIYGDKCAFYDCNFIGFQDTLWDVQGRHYFKNCHIKGAVDFIFGNGQSYYEDCVVNATSPGYITAQGRSSNSELSGFVFRRGSVVGSGSSLLGRAYGPCSRVIFQETNLGSVVDPRGWDAWNFTKHTGCISYAEIECSGAGANTSKRVPWMKKLKTSALRGQFSKSKFINQDSWLTKLPLNRRHLFLKI 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8573g00004 345 ProSitePatterns Pectinesterase signature 2. 191 200 IPR033131 -
Mupr8573g00004 345 FunFam Pectinesterase 31 335 - -
Mupr8573g00004 345 SUPERFAMILY Pectin lyase-like 31 333 IPR011050 -
Mupr8573g00004 345 Gene3D - 30 339 IPR012334 -
Mupr8573g00004 345 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 30 332 - -
Mupr8573g00004 345 Pfam Pectinesterase 37 327 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8573g00004 Mupr-Chr8573 28455 30221 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8573g00004 20 277 Carbohydrate Esterase AT2G19150 43.116 1.25e-70 220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8573g00004 - - gmx:100800737 460.685